Paired ONT and downsampled Illumina cfDNA dataset

Dr Norbert Moldovan
n.moldovan@amsterdamumc.nl

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Dataset ID	Description	Technology	Samples
EGAD00001009392	The dataset contains 12 lung cancer plasma cfDNA samples, 8 bladder cancer and 2 healthy control urine cfDNA samples collected in EDTA collection tubes. Shallow WGS was performed using both Oxford Nanopore Technologies' MinION platform with an R9.4.1 flow cell and the SQK-PBK004 kit (22 files) and Illumina Novaseq platform with an S4 flow cell in PE150bp configuration (2x22 files).	Illumina NovaSeq 6000 MinION	53