VIB CCB Translational Genetics Data Access Committee

diether.lambrechts@kuleuven.be

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Dataset ID	Description	Technology	Samples
EGAD00001011342	Single-cell RNA sequencing of 43 bronchoalveolar lavage fluid (BALF) samples from 15 CAPA and 22 COVID-19 mechanically ventilated patients.	Illumina NovaSeq 6000	43
EGAD50000000317	We included 16 fresh tumor samples of biopsy-proven invasive penile squamous cell carcinomas and 6 adult non-malignant inner prepuce samples. Single-cell RNA sequencing was performed (10x genomics). An HPV reference genome of 15 high-risk HPV types was generated and we mapped all single cell reads to the GRCh38 human and HPV reference genome using CellRanger. Targeted next-generation sequencing (tNGS) was performed for the detection of TP53 loss-of-function mutations.	Illumina NovaSeq 6000	22