RNAseq of neuroblastoma PDX and cell lines

This dataset contains 72 RNAseq (BAM and Fastq files are available for each sample).

114 samples
DAC: EGAC00001001789
Technology: Illumina NovaSeq 6000

Access Policy1 Study Files

Metadata

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NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
TS DUO:0000025 (version: 2021-02-23)time limit on useThis data use modifier indicates that use is approved for a specific number of months.
US DUO:0000026 (version: 2021-02-23)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
NPU DUO:0000045 (version: 2021-02-23)not for profit organisation use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations.

Access to the sequence data is controlled by the DAC. Access to data will be granted to qualified investigators for appropriate use after request to one member of the DAC and establishment of a research data transfer and use agreement form. DUO:0000018 - not-for-profit use only

Access to the sequence data is controlled by the DAC. Access to data will be granted to qualified investigators for appropriate use after request to one member of the DAC and establishment of a research data transfer and use agreement form. DUO:0000018 - not-for-profit use only

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001004781	Neuroblastoma tumor heterogeneity and cell plasticity (from PDX and cell lines)	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00004834268	bam	1.2 GB
EGAF00005397345	fastq.gz	1.1 GB
EGAF00005397346	fastq.gz	1.2 GB
EGAF00007946071	fastq.gz	2.2 GB
EGAF00007946072	fastq.gz	2.2 GB
EGAF00007946073	fastq.gz	2.2 GB
EGAF00007946074	fastq.gz	2.3 GB
EGAF00007946075	fastq.gz	2.1 GB
EGAF00007946076	fastq.gz	2.2 GB
EGAF00007946077	fastq.gz	2.1 GB
EGAF00007946078	fastq.gz	2.2 GB
EGAF00007946079	fastq.gz	2.2 GB
EGAF00007946080	fastq.gz	2.3 GB
EGAF00007946081	fastq.gz	2.1 GB
EGAF00007946082	fastq.gz	2.2 GB
EGAF00007946083	fastq.gz	1.4 GB
EGAF00007946084	fastq.gz	1.4 GB
EGAF00007946085	fastq.gz	1.4 GB
EGAF00007946086	fastq.gz	1.4 GB
EGAF00007946087	bam	1.9 GB
EGAF00007946088	fastq.gz	1.5 GB
EGAF00007946089	fastq.gz	1.6 GB
EGAF00007946090	fastq.gz	2.0 GB
EGAF00007946091	fastq.gz	2.1 GB
EGAF00007946092	bam	2.8 GB
EGAF00007946093	fastq.gz	2.3 GB
EGAF00007946094	fastq.gz	2.4 GB
EGAF00007946095	fastq.gz	1.3 GB
EGAF00007946096	fastq.gz	1.4 GB
EGAF00007946097	fastq.gz	2.5 GB
EGAF00007946098	fastq.gz	2.5 GB
EGAF00007946108	fastq.gz	569.3 MB
EGAF00007946109	fastq.gz	603.7 MB
EGAF00007946110	fastq.gz	2.0 GB
EGAF00007946111	fastq.gz	2.1 GB
EGAF00007946112	bam	3.0 GB
EGAF00007946113	fastq.gz	710.9 MB
EGAF00007946114	fastq.gz	736.8 MB
EGAF00007946115	fastq.gz	1.8 GB
EGAF00007946116	fastq.gz	1.9 GB
EGAF00007946117	fastq.gz	661.7 MB
EGAF00007946118	fastq.gz	688.1 MB
EGAF00007946119	fastq.gz	1.8 GB
EGAF00007946120	fastq.gz	1.8 GB
EGAF00007946121	fastq.gz	2.0 GB
EGAF00007946122	fastq.gz	2.1 GB
EGAF00007946123	fastq.gz	815.1 MB
EGAF00007946124	fastq.gz	864.9 MB
EGAF00007946125	fastq.gz	1.7 GB
EGAF00007946126	fastq.gz	1.8 GB
EGAF00007946127	bam	2.6 GB
EGAF00007946128	fastq.gz	2.3 GB
EGAF00007946129	fastq.gz	2.4 GB
EGAF00007946130	bam	3.1 GB
EGAF00007946131	fastq.gz	2.0 GB
EGAF00007946132	fastq.gz	2.0 GB
EGAF00007946133	fastq.gz	2.1 GB
EGAF00007946134	fastq.gz	2.2 GB
EGAF00007946135	bam	3.0 GB
EGAF00007946136	fastq.gz	2.2 GB
EGAF00007946137	fastq.gz	2.2 GB
EGAF00007946139	fastq.gz	1.9 GB
EGAF00007946140	fastq.gz	1.9 GB
EGAF00007946143	fastq.gz	3.1 GB
EGAF00007946144	fastq.gz	3.1 GB
EGAF00007946146	fastq.gz	2.0 GB
EGAF00007946147	fastq.gz	2.1 GB
EGAF00007946148	fastq.gz	3.2 GB
EGAF00007946149	fastq.gz	3.2 GB
EGAF00007946150	bam	4.3 GB
EGAF00007946151	fastq.gz	1.7 GB
EGAF00007946152	fastq.gz	1.8 GB
EGAF00007946153	fastq.gz	2.6 GB
EGAF00007946154	fastq.gz	2.7 GB
EGAF00007946155	bam	4.4 GB
EGAF00007946156	fastq.gz	2.1 GB
EGAF00007946157	fastq.gz	2.2 GB
EGAF00007946158	fastq.gz	2.1 GB
EGAF00007946159	fastq.gz	2.2 GB
EGAF00007946160	fastq.gz	2.5 GB
EGAF00007946161	fastq.gz	2.6 GB
EGAF00007946162	fastq.gz	758.7 MB
EGAF00007946163	fastq.gz	769.8 MB
EGAF00007946164	fastq.gz	2.2 GB
EGAF00007946165	fastq.gz	2.3 GB
EGAF00007946166	fastq.gz	1.1 GB
EGAF00007946167	fastq.gz	1.0 GB
EGAF00007946168	bam	1.5 GB
EGAF00007946169	fastq.gz	742.7 MB
EGAF00007946170	fastq.gz	763.7 MB
EGAF00007946171	bam	1.1 GB
EGAF00007946172	fastq.gz	1.6 GB
EGAF00007946173	fastq.gz	1.6 GB
EGAF00007946174	bam	2.4 GB
EGAF00007946175	fastq.gz	1.7 GB
EGAF00007946176	fastq.gz	1.7 GB
EGAF00007946177	bam	2.4 GB
EGAF00007946178	fastq.gz	1.6 GB
EGAF00007946179	fastq.gz	1.6 GB
EGAF00007946180	bam	2.3 GB
EGAF00007946181	fastq.gz	1.6 GB
EGAF00007946182	fastq.gz	1.6 GB
EGAF00007946183	bam	2.1 GB
EGAF00007946184	fastq.gz	1.3 GB
EGAF00007946185	fastq.gz	1.3 GB
EGAF00007946186	bam	1.7 GB
EGAF00007946187	fastq.gz	2.2 GB
EGAF00007946188	fastq.gz	2.2 GB
EGAF00007946189	bam	2.9 GB
EGAF00007946190	fastq.gz	2.8 GB
EGAF00007946191	fastq.gz	2.9 GB
EGAF00007946192	bam	4.0 GB
EGAF00007946193	fastq.gz	1.6 GB
EGAF00007946194	fastq.gz	1.6 GB
EGAF00007946195	bam	2.4 GB
EGAF00007946196	fastq.gz	1.7 GB
EGAF00007946197	fastq.gz	1.7 GB
EGAF00007946198	bam	2.3 GB
EGAF00007946199	fastq.gz	1.9 GB
EGAF00007946200	fastq.gz	2.0 GB
EGAF00007946201	bam	2.6 GB
EGAF00007946202	fastq.gz	2.0 GB
EGAF00007946203	fastq.gz	2.0 GB
EGAF00007946204	bam	2.5 GB
EGAF00007946205	fastq.gz	1.9 GB
EGAF00007946206	fastq.gz	2.0 GB
EGAF00007946207	fastq.gz	2.3 GB
EGAF00007946208	fastq.gz	2.4 GB
EGAF00007946209	fastq.gz	2.3 GB
EGAF00007946210	fastq.gz	2.4 GB
EGAF00007946211	fastq.gz	2.3 GB
EGAF00007946212	fastq.gz	2.4 GB
EGAF00007946213	fastq.gz	1.9 GB
EGAF00007946214	fastq.gz	2.0 GB
EGAF00007946215	fastq.gz	3.4 GB
EGAF00007946216	fastq.gz	3.5 GB
EGAF00007946217	bam	4.8 GB
EGAF00007946218	bam	5.1 GB
EGAF00007946219	bam	1.7 GB
EGAF00007946220	fastq.gz	2.2 GB
EGAF00007946221	fastq.gz	2.3 GB
EGAF00007946222	bam	3.0 GB
EGAF00007946223	fastq.gz	1.8 GB
EGAF00007946224	fastq.gz	1.8 GB
EGAF00007946225	bam	2.4 GB
EGAF00007946226	fastq.gz	1.6 GB
EGAF00007946227	fastq.gz	1.6 GB
EGAF00007946228	bam	2.1 GB
EGAF00007946229	fastq.gz	2.5 GB
EGAF00007946230	fastq.gz	2.6 GB
EGAF00007946231	bam	3.4 GB
EGAF00007946232	fastq.gz	1.7 GB
EGAF00007946233	fastq.gz	1.7 GB
EGAF00007946234	bam	2.6 GB
EGAF00007946235	fastq.gz	1.9 GB
EGAF00007946236	fastq.gz	1.9 GB
EGAF00007946237	bam	2.7 GB
EGAF00007946238	fastq.gz	1.8 GB
EGAF00007946239	fastq.gz	1.8 GB
EGAF00007946240	bam	2.5 GB
EGAF00007946241	fastq.gz	1.6 GB
EGAF00007946242	fastq.gz	1.6 GB
EGAF00007946243	bam	2.2 GB
EGAF00007946244	fastq.gz	2.3 GB
EGAF00007946245	fastq.gz	2.4 GB
EGAF00007946246	bam	3.1 GB
EGAF00007946247	fastq.gz	2.6 GB
EGAF00007946248	fastq.gz	2.7 GB
EGAF00007946249	bam	3.6 GB
EGAF00007946250	fastq.gz	2.3 GB
EGAF00007946251	fastq.gz	2.4 GB
EGAF00007946252	bam	3.1 GB
172 Files (361.4 GB)