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Single-cell multi-omics analysis of COVID-19 patients with pre-existing autoimmune diseases

Single-cell analysis of the transcriptome, T cell immune receptors, and surface proteome (CITE-seq) from peripheral blood mononuclear cells (PBMCs) of COVID-19 patients with pre-existing autoimmune diseases (rheumatoid arthritis n = 5, psoriasis n = 4, or multiple sclerosis n = 3), as well as COVID-19 patients without pre-existing autoimmunity as controls (n = 10) to investigate altered immune responses.

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Wellcome Trust Sanger Institute Data Sharing Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004489 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005415087 cram 15.1 GB
EGAF00005415088 cram 13.1 GB
EGAF00005415089 cram 19.7 GB
EGAF00005415090 cram 14.2 GB
EGAF00005415103 cram 2.9 GB
EGAF00005415104 cram 3.4 GB
EGAF00005415105 cram 2.4 GB
EGAF00005415106 cram 2.7 GB
EGAF00005415119 cram 1.4 GB
EGAF00005415120 cram 2.0 GB
EGAF00005415121 cram 1.6 GB
EGAF00005415122 cram 1.8 GB
EGAF00005415135 cram 17.0 GB
EGAF00005415136 cram 6.8 GB
EGAF00005415137 cram 20.1 GB
EGAF00005415138 cram 18.7 GB
EGAF00005415151 cram 3.0 GB
EGAF00005415152 cram 3.5 GB
EGAF00005415153 cram 3.2 GB
EGAF00005415154 cram 3.6 GB
EGAF00005415167 cram 2.6 GB
EGAF00005415168 cram 2.3 GB
EGAF00005415169 cram 1.5 GB
EGAF00005415170 cram 1.9 GB
EGAF00005415411 cram 3.4 GB
EGAF00005415412 cram 5.3 GB
EGAF00005415413 cram 7.0 GB
EGAF00005415414 cram 1.9 GB
EGAF00005415415 cram 4.2 GB
EGAF00005415416 cram 4.0 GB
EGAF00005415417 cram 5.4 GB
EGAF00005415418 cram 5.2 GB
EGAF00005415419 cram 5.5 GB
EGAF00005415420 cram 4.7 GB
EGAF00005415421 cram 3.0 GB
EGAF00005415422 cram 4.2 GB
EGAF00005415459 cram 973.3 MB
EGAF00005415460 cram 752.0 MB
EGAF00005415461 cram 746.7 MB
EGAF00005415462 cram 691.6 MB
EGAF00005415463 cram 909.1 MB
EGAF00005415464 cram 746.0 MB
EGAF00005415465 cram 721.4 MB
EGAF00005415466 cram 667.3 MB
EGAF00005415467 cram 871.0 MB
EGAF00005415468 cram 897.0 MB
EGAF00005415469 cram 830.7 MB
EGAF00005415470 cram 493.6 MB
EGAF00005415475 cram 1.3 GB
EGAF00005415477 cram 1.6 GB
EGAF00005415480 cram 1.5 GB
EGAF00005415481 cram 1.0 GB
EGAF00005415484 cram 1.4 GB
EGAF00005415485 cram 1.1 GB
EGAF00005415487 cram 1.1 GB
EGAF00005415489 cram 1.4 GB
EGAF00005415491 cram 1.4 GB
EGAF00005415494 cram 950.1 MB
EGAF00005415495 cram 1.7 GB
EGAF00005415498 cram 928.1 MB
EGAF00005415555 cram 3.4 GB
EGAF00005415556 cram 5.3 GB
EGAF00005415557 cram 7.0 GB
EGAF00005415558 cram 1.9 GB
EGAF00005415559 cram 4.2 GB
EGAF00005415560 cram 4.0 GB
EGAF00005415561 cram 5.4 GB
EGAF00005415562 cram 5.2 GB
EGAF00005415563 cram 5.4 GB
EGAF00005415564 cram 4.7 GB
EGAF00005415565 cram 3.0 GB
EGAF00005415566 cram 4.1 GB
EGAF00005415603 cram 944.0 MB
EGAF00005415604 cram 731.9 MB
EGAF00005415605 cram 722.7 MB
EGAF00005415606 cram 668.7 MB
EGAF00005415607 cram 875.2 MB
EGAF00005415608 cram 721.7 MB
EGAF00005415609 cram 698.2 MB
EGAF00005415610 cram 640.8 MB
EGAF00005415611 cram 836.2 MB
EGAF00005415612 cram 868.5 MB
EGAF00005415613 cram 805.3 MB
EGAF00005415614 cram 478.2 MB
EGAF00005415619 cram 1.3 GB
EGAF00005415621 cram 1.6 GB
EGAF00005415624 cram 1.5 GB
EGAF00005415625 cram 1.0 GB
EGAF00005415628 cram 1.3 GB
EGAF00005415629 cram 1.1 GB
EGAF00005415631 cram 1.1 GB
EGAF00005415633 cram 1.4 GB
EGAF00005415635 cram 1.3 GB
EGAF00005415638 cram 928.8 MB
EGAF00005415639 cram 1.7 GB
EGAF00005415642 cram 910.3 MB
EGAF00005415699 cram 3.4 GB
EGAF00005415700 cram 5.3 GB
EGAF00005415701 cram 7.0 GB
EGAF00005415702 cram 1.9 GB
EGAF00005415703 cram 4.2 GB
EGAF00005415704 cram 4.0 GB
EGAF00005415705 cram 5.4 GB
EGAF00005415706 cram 5.1 GB
EGAF00005415707 cram 5.4 GB
EGAF00005415708 cram 4.6 GB
EGAF00005415709 cram 3.0 GB
EGAF00005415710 cram 4.1 GB
EGAF00005415747 cram 943.7 MB
EGAF00005415748 cram 731.5 MB
EGAF00005415749 cram 723.3 MB
EGAF00005415750 cram 671.2 MB
EGAF00005415751 cram 877.3 MB
EGAF00005415752 cram 723.8 MB
EGAF00005415753 cram 698.4 MB
EGAF00005415754 cram 643.4 MB
EGAF00005415755 cram 838.9 MB
EGAF00005415756 cram 870.0 MB
EGAF00005415757 cram 807.8 MB
EGAF00005415758 cram 478.3 MB
EGAF00005415763 cram 1.3 GB
EGAF00005415765 cram 1.6 GB
EGAF00005415768 cram 1.5 GB
EGAF00005415769 cram 1.0 GB
EGAF00005415772 cram 1.4 GB
EGAF00005415773 cram 1.1 GB
EGAF00005415775 cram 1.1 GB
EGAF00005415777 cram 1.4 GB
EGAF00005415779 cram 1.3 GB
EGAF00005415782 cram 941.8 MB
EGAF00005415783 cram 1.7 GB
EGAF00005415786 cram 922.8 MB
EGAF00005415843 cram 2.7 GB
EGAF00005415844 cram 3.3 GB
EGAF00005415845 cram 2.6 GB
EGAF00005415846 cram 3.4 GB
EGAF00005415847 cram 3.5 GB
EGAF00005415848 cram 2.9 GB
EGAF00005415849 cram 2.4 GB
EGAF00005415850 cram 4.0 GB
EGAF00005415851 cram 2.5 GB
EGAF00005415852 cram 2.8 GB
EGAF00005415853 cram 2.8 GB
EGAF00005415854 cram 1.8 GB
EGAF00005415855 cram 3.9 GB
EGAF00005415856 cram 5.2 GB
EGAF00005415857 cram 5.5 GB
EGAF00005415858 cram 2.6 GB
EGAF00005415859 cram 11.0 GB
EGAF00005415860 cram 11.8 GB
EGAF00005415861 cram 10.2 GB
EGAF00005415862 cram 12.8 GB
EGAF00005415863 cram 20.5 GB
EGAF00005415864 cram 13.5 GB
EGAF00005415865 cram 5.2 GB
EGAF00005415866 cram 16.1 GB
EGAF00005415867 cram 13.9 GB
EGAF00005415868 cram 16.1 GB
EGAF00005415869 cram 11.5 GB
EGAF00005415870 cram 9.8 GB
EGAF00005415871 cram 11.2 GB
EGAF00005415872 cram 11.2 GB
EGAF00005415873 cram 18.1 GB
EGAF00005415874 cram 10.0 GB
EGAF00005415875 cram 1.8 GB
EGAF00005415876 cram 1.8 GB
EGAF00005415877 cram 98.4 MB
EGAF00005415878 cram 2.0 GB
EGAF00005415879 cram 1.6 GB
EGAF00005415880 cram 1.3 GB
EGAF00005415881 cram 1.4 GB
EGAF00005415882 cram 1.8 GB
EGAF00005415883 cram 1.3 GB
EGAF00005415884 cram 1.6 GB
EGAF00005415885 cram 1.7 GB
EGAF00005415886 cram 1.5 GB
EGAF00005415887 cram 1.9 GB
EGAF00005415888 cram 1.4 GB
EGAF00005415889 cram 1.8 GB
EGAF00005415890 cram 1.2 GB
EGAF00005423442 csv.gz 3.2 kB
EGAF00005423443 csv.gz 508.0 kB
182 Files (677.5 GB)