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Whole Exome Sequencing of Localized Prostate Cancer Patients

Whole exome sequencing of localized prostate cancer patients in this study contained pair tumor-normal samples and validated tumor content.

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Controlled-access Data Policy

Policy Data Requests All data requests must include the reason the data is needed, type of data needed, period of time data will be used, and how the data will be secured. Data Consultations The Committee may require the requesting party to consult with a Medical Education Data Consultant in order to verify the use of the data. Consultations include the following types of issues: Clarify intent of continuous improvement work Clarify intent of educational research Review data security and confidentiality requirements Confirm availability of data Clarify the type of data requested Consultations will be required for all requests considered “High Risk” by the committee. These may include data request for de-identified or easily identifiable data; and requests from individuals without prior experience handling sensitive data. Data Security Data must be stored in accordance with UCSF minimum security standards for electronic information at http://it.ucsf.edu/policies/ucsf-minimum-security-standards-electronic-information-resources(link is external). All requestors must demonstrate understanding of the Family Educational Rights and Privacy Act (FERPA). Access to Data The Committee will only provide access to data for which medical education is the primary owner. When 3rd party data is requested to be incorporated into a data set, the requestor is responsible for securing access to the specified data. The Committee retains the right to prioritize the fulfillment of data requests based on current priorities and the complexity of the request and to refuse any data requests. Current medical students and residents cannot be granted access to any peer learner demographic or performance data, regardless of its format. Access to program performance data and research conducted by the SOM on its curriculum and programs will require approval from the Director of Program Evaluation. Research Data Requests Approval by the UCSF Institutional Review Board (IRB) is required prior for the release of any data used for research. IRB approval for access to data does not override restrictions described in this policy. Any changes to the IRB protocol including changes to the research team membership must be shared promptly with the OME consultant assigned to the request. Any data sharing with investigators outside of UCSF must be approved by both the IRB and the OME consultant.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005685 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005561010 fq.gz 3.5 GB
EGAF00005561011 fq.gz 3.6 GB
EGAF00005561012 fq.gz 1.6 GB
EGAF00005561013 fq.gz 1.7 GB
EGAF00005561014 fq.gz 3.0 GB
EGAF00005561015 fq.gz 3.1 GB
EGAF00005561016 fq.gz 1.5 GB
EGAF00005561017 fq.gz 1.6 GB
EGAF00005561018 fq.gz 1.6 GB
EGAF00005561019 fq.gz 1.7 GB
EGAF00005561020 fq.gz 3.9 GB
EGAF00005561021 fq.gz 4.2 GB
12 Files (31.2 GB)