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RNA sequencing data for primary and recurrent ovarian granulosa cell tumors

RNA sequencing dataset for primary and recurrent ovarian granulosa cell tumors consists of 24 .bam files with aligned reads, including 8 primary and 16 recurrent tumors. Total RNA was extracted from cryopreserved tissue of adult-type granulosa cell tumor samples. Libraries were prepared from cDNA using the NuGEN Ovation Ultralow Library System V2 (San Carlos, CA). Paired-end bulk RNA sequencing was performed on the Illumina HiSeq 2000 platform. RNA sequencing reads were aligned to the hg19/GRCh37 reference human genome using the STAR software (version 2.6.0b) with default parameters. Samples description: GCT001 Adult-type Granulosa Cell Tumor: recurrent tumor GCT002 Adult-type Granulosa Cell Tumor: primary tumor GCT003 Adult-type Granulosa Cell Tumor: recurrent tumor GCT004 Adult-type Granulosa Cell Tumor: primary tumor GCT005 Adult-type Granulosa Cell Tumor: recurrent tumor GCT006 Adult-type Granulosa Cell Tumor: recurrent tumor GCT007 Adult-type Granulosa Cell Tumor: primary tumor GCT008 Adult-type Granulosa Cell Tumor: recurrent tumor GCT009 Adult-type Granulosa Cell Tumor: recurrent tumor GCT010 Adult-type Granulosa Cell Tumor: recurrent tumor GCT011 Adult-type Granulosa Cell Tumor: primary tumor GCT012 Adult-type Granulosa Cell Tumor: recurrent tumor GCT013 Adult-type Granulosa Cell Tumor: recurrent tumor GCT014 Adult-type Granulosa Cell Tumor: recurrent tumor GCT015 Adult-type Granulosa Cell Tumor: recurrent tumor GCT016 Adult-type Granulosa Cell Tumor: recurrent tumor GCT017 Adult-type Granulosa Cell Tumor: recurrent tumor GCT018 Adult-type Granulosa Cell Tumor: primary tumor GCT019 Adult-type Granulosa Cell Tumor: recurrent tumor GCT020 Adult-type Granulosa Cell Tumor: primary tumor GCT021 Adult-type Granulosa Cell Tumor: primary tumor GCT022 Adult-type Granulosa Cell Tumor: recurrent tumor GCT023 Adult-type Granulosa Cell Tumor: recurrent tumor GCT024 Adult-type Granulosa Cell Tumor: primary tumor

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006478 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006627575 bam 7.0 GB
EGAF00006627576 bam 8.1 GB
EGAF00006627577 bam 7.3 GB
EGAF00006627578 bam 7.5 GB
EGAF00006627579 bam 7.0 GB
EGAF00006627580 bam 6.3 GB
EGAF00006627581 bam 7.1 GB
EGAF00006627582 bam 7.5 GB
EGAF00006627583 bam 6.1 GB
EGAF00006627584 bam 7.5 GB
EGAF00006627585 bam 7.7 GB
EGAF00006627586 bam 8.5 GB
EGAF00006627587 bam 6.7 GB
EGAF00006627588 bam 6.4 GB
EGAF00006627589 bam 7.7 GB
EGAF00006627590 bam 6.8 GB
EGAF00006627591 bam 8.0 GB
EGAF00006627592 bam 6.8 GB
EGAF00006627593 bam 8.4 GB
EGAF00006627594 bam 7.0 GB
EGAF00006627595 bam 7.1 GB
EGAF00006627596 bam 6.4 GB
EGAF00006627597 bam 5.9 GB
EGAF00006627598 bam 7.9 GB
EGAF00006627599 bai 5.2 MB
EGAF00006627600 bai 5.3 MB
EGAF00006627601 bai 4.6 MB
EGAF00006627602 bai 4.5 MB
EGAF00006627603 bai 4.9 MB
EGAF00006627604 bai 5.4 MB
EGAF00006627605 bai 5.4 MB
EGAF00006627606 bai 5.1 MB
EGAF00006627607 bai 5.6 MB
EGAF00006627608 bai 4.7 MB
EGAF00006627609 bai 5.3 MB
EGAF00006627610 bai 5.5 MB
EGAF00006627611 bai 5.3 MB
EGAF00006627612 bai 5.0 MB
EGAF00006627613 bai 5.5 MB
EGAF00006627614 bai 5.3 MB
EGAF00006627615 bai 5.0 MB
EGAF00006627616 bai 5.3 MB
EGAF00006627617 bai 4.5 MB
EGAF00006627618 bai 5.5 MB
EGAF00006627619 bai 5.6 MB
EGAF00006627620 bai 5.7 MB
EGAF00006627621 bai 5.2 MB
EGAF00006627622 bai 5.1 MB
48 Files (172.6 GB)