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PGDx elio™ plasma resolve assay: targeted sequencing analyses of WBC DNA

The dataset "PGDx elio™ plasma resolve assay: targeted sequencing analyses of WBC DNA" includes paired end FASTQ reads of 49 white blood cell (WBC) genomic DNA samples from metastatic colorectal cancer patients. Sequencing was performed using a panel consisting of 33 genes, covering over 237,000 bp, targeting 25,000x depth across the targeted regions.

Request Access

To request access to the NKI CAIRO5 dataset, please provide the following information in your Data Access Request: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and Dataset Accession Number(s) - Brief abstract of the Project in which the Data will be used (500 words max.) - All Individuals who will be allowed access to the requested datasets by the Recipient Institution After receipt and review of your Data Access Request by the Data Access Committee, you will receive a Data Transfer Agreement to be completed, signed and returned to the Data Access Committee, prior to being granted access to the requested dataset(s).

To request access to the NKI CAIRO5 dataset, please provide the following information in your Data Access Request: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and Dataset Accession Number(s) - Brief abstract of the Project in which the Data will be used (500 words max.) - All Individuals who will be allowed access to the requested datasets by the Recipient Institution After receipt and review of your Data Access Request by the Data Access Committee, you will receive a Data Transfer Agreement to be completed, signed and returned to the Data Access Committee, prior to being granted access to the requested dataset(s). For the avoidance of doubt, the Data Access Committee reserves the right to withhold granting access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006695 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00007692647 fastq.gz 6.5 GB
EGAF00007692648 fastq.gz 6.6 GB
EGAF00007692655 fastq.gz 7.3 GB
EGAF00007692656 fastq.gz 7.3 GB
EGAF00007692657 fastq.gz 5.5 GB
EGAF00007692658 fastq.gz 5.6 GB
EGAF00007692659 fastq.gz 5.6 GB
EGAF00007692660 fastq.gz 5.6 GB
EGAF00007692661 fastq.gz 5.3 GB
EGAF00007692662 fastq.gz 5.3 GB
EGAF00007692663 fastq.gz 6.8 GB
EGAF00007692664 fastq.gz 6.9 GB
EGAF00007692669 fastq.gz 8.1 GB
EGAF00007692670 fastq.gz 8.1 GB
EGAF00007692671 fastq.gz 7.1 GB
EGAF00007692672 fastq.gz 7.2 GB
EGAF00007692673 fastq.gz 6.8 GB
EGAF00007692674 fastq.gz 6.8 GB
EGAF00007692675 fastq.gz 6.9 GB
EGAF00007692676 fastq.gz 7.1 GB
EGAF00007692679 fastq.gz 8.0 GB
EGAF00007692680 fastq.gz 8.2 GB
EGAF00007692681 fastq.gz 7.6 GB
EGAF00007692682 fastq.gz 7.6 GB
EGAF00007692683 fastq.gz 6.3 GB
EGAF00007692684 fastq.gz 6.4 GB
EGAF00007692685 fastq.gz 4.9 GB
EGAF00007692686 fastq.gz 4.9 GB
EGAF00007692687 fastq.gz 6.6 GB
EGAF00007692688 fastq.gz 6.7 GB
EGAF00007692689 fastq.gz 7.0 GB
EGAF00007692690 fastq.gz 7.1 GB
EGAF00007692691 fastq.gz 7.2 GB
EGAF00007692692 fastq.gz 7.2 GB
EGAF00007692693 fastq.gz 6.0 GB
EGAF00007692694 fastq.gz 6.0 GB
EGAF00007692697 fastq.gz 6.0 GB
EGAF00007692698 fastq.gz 6.1 GB
EGAF00007692699 fastq.gz 5.5 GB
EGAF00007692700 fastq.gz 5.5 GB
EGAF00007692701 fastq.gz 6.7 GB
EGAF00007692702 fastq.gz 6.8 GB
EGAF00007692705 fastq.gz 5.2 GB
EGAF00007692706 fastq.gz 5.3 GB
EGAF00007692707 fastq.gz 6.2 GB
EGAF00007692708 fastq.gz 6.3 GB
EGAF00007692709 fastq.gz 7.1 GB
EGAF00007692710 fastq.gz 7.2 GB
EGAF00007692711 fastq.gz 7.2 GB
EGAF00007692712 fastq.gz 7.3 GB
EGAF00007692713 fastq.gz 7.0 GB
EGAF00007692714 fastq.gz 7.1 GB
EGAF00007692717 fastq.gz 7.2 GB
EGAF00007692718 fastq.gz 7.4 GB
EGAF00007692721 fastq.gz 7.6 GB
EGAF00007692722 fastq.gz 7.7 GB
EGAF00007692723 fastq.gz 7.1 GB
EGAF00007692724 fastq.gz 7.2 GB
EGAF00007692725 fastq.gz 6.8 GB
EGAF00007692726 fastq.gz 6.8 GB
EGAF00007692727 fastq.gz 7.1 GB
EGAF00007692728 fastq.gz 7.2 GB
EGAF00007692729 fastq.gz 6.6 GB
EGAF00007692730 fastq.gz 6.7 GB
EGAF00007692739 fastq.gz 7.0 GB
EGAF00007692740 fastq.gz 7.2 GB
EGAF00007692749 fastq.gz 6.8 GB
EGAF00007692750 fastq.gz 6.8 GB
EGAF00007692759 fastq.gz 7.2 GB
EGAF00007692760 fastq.gz 7.3 GB
EGAF00007692767 fastq.gz 8.6 GB
EGAF00007692768 fastq.gz 8.8 GB
EGAF00007692777 fastq.gz 7.0 GB
EGAF00007692778 fastq.gz 7.2 GB
EGAF00007692785 fastq.gz 5.7 GB
EGAF00007692786 fastq.gz 5.8 GB
EGAF00007692795 fastq.gz 5.6 GB
EGAF00007692796 fastq.gz 5.6 GB
EGAF00007692803 fastq.gz 4.9 GB
EGAF00007692804 fastq.gz 4.9 GB
EGAF00007692811 fastq.gz 5.7 GB
EGAF00007692812 fastq.gz 5.7 GB
EGAF00007692821 fastq.gz 5.7 GB
EGAF00007692822 fastq.gz 5.9 GB
EGAF00007692833 fastq.gz 7.1 GB
EGAF00007692834 fastq.gz 7.3 GB
EGAF00007692841 fastq.gz 7.5 GB
EGAF00007692842 fastq.gz 7.6 GB
EGAF00007692849 fastq.gz 7.1 GB
EGAF00007692850 fastq.gz 7.2 GB
EGAF00007692859 fastq.gz 6.5 GB
EGAF00007692860 fastq.gz 6.5 GB
EGAF00007692869 fastq.gz 7.8 GB
EGAF00007692870 fastq.gz 7.9 GB
EGAF00007692881 fastq.gz 6.2 GB
EGAF00007692882 fastq.gz 6.2 GB
EGAF00007692891 fastq.gz 5.8 GB
EGAF00007692892 fastq.gz 5.8 GB
98 Files (654.0 GB)