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Comprehensive single-cell genome analysis at nucleotide resolution using the PTA Analysis Toolbox

Whole genome sequencing data of 57 single (PTA), clonally expanded and bulk human cells. Cells were obtained from bone marrow samples of patients with Fanconi Anemia (PMCFANCNN) or pediatric AML (PBNNNNN), from a clonal intestinal organoid line (STE0072/D-ORGWTNISL), from human cord blood (PMCCB15) and from a human lymphoblastoid cell line (PMCAHH1). WGS libraries were sequenced to ~15-30x genomic coverage (paired-end) on an Illumina Novaseq.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007288 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00008122264 bam 27.4 GB
EGAF00008122265 bam 31.2 GB
EGAF00008122266 bam 30.6 GB
EGAF00008122267 bam 30.5 GB
EGAF00008122268 bam 29.9 GB
EGAF00008122269 bam 56.6 GB
EGAF00008122270 bam 30.3 GB
EGAF00008122271 bam 55.0 GB
EGAF00008122272 bam 41.8 GB
EGAF00008122273 bam 30.0 GB
EGAF00008122274 bam 26.5 GB
EGAF00008122275 bam 27.7 GB
EGAF00008122276 bam 48.0 GB
EGAF00008122277 bam 27.3 GB
EGAF00008122278 bam 29.8 GB
EGAF00008122279 bam 41.8 GB
EGAF00008122280 bam 51.6 GB
EGAF00008122281 bam 32.8 GB
EGAF00008122282 bam 35.4 GB
EGAF00008122283 bam 39.4 GB
EGAF00008122284 bam 60.6 GB
EGAF00008122285 bam 3.0 MB
EGAF00008122286 bam 54.8 GB
EGAF00008122287 bam 23.4 GB
EGAF00008122288 bam 24.4 GB
EGAF00008122289 bam 25.9 GB
EGAF00008122290 bam 28.1 GB
EGAF00008122291 bam 25.0 GB
EGAF00008122292 bam 24.2 GB
EGAF00008122293 bam 24.6 GB
EGAF00008122294 bam 26.9 GB
EGAF00008122295 bam 25.6 GB
EGAF00008122296 bam 29.4 GB
EGAF00008122297 bam 26.6 GB
EGAF00008122298 bam 25.6 GB
EGAF00008122299 bam 25.0 GB
EGAF00008122300 bam 33.1 GB
EGAF00008122301 bam 31.9 GB
EGAF00008122302 bam 28.3 GB
EGAF00008122303 bam 31.5 GB
EGAF00008122304 bam 25.2 GB
EGAF00008122305 bam 27.6 GB
EGAF00008122306 bam 28.2 GB
EGAF00008122307 bam 28.4 GB
EGAF00008122308 bam 28.2 GB
EGAF00008122309 bam 36.1 GB
EGAF00008122310 bam 29.3 GB
EGAF00008122311 bam 23.2 GB
EGAF00008122312 bam 24.6 GB
EGAF00008122313 bam 27.4 GB
EGAF00008122314 bam 23.3 GB
EGAF00008122315 bam 21.5 GB
EGAF00008122316 bam 25.8 GB
EGAF00008122317 bam 24.2 GB
EGAF00008122318 bam 24.7 GB
EGAF00008122319 bam 26.9 GB
EGAF00008122320 bam 25.5 GB
EGAF00008122321 bam 52.8 GB
EGAF00008181442 bam 29.5 GB
EGAF00008181443 bam 32.0 GB
EGAF00008181444 bam 26.4 GB
EGAF00008181445 bam 27.5 GB
EGAF00008181446 bam 30.7 GB
63 Files (1.9 TB)