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Oncoprint GSCCs

This dataset contains DNA sequencing data from 7 GSCCs (data for BT569 is not available). We performed focused exome sequencing (43 most mutated genes in GBM), combined with OneSeq analysis (Agilent) on the GSCCs and identified both shared and GSCC-specific mutations. For CME038, whole genome sequencing was performed.

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Access to VIB-UZL human datasets is governed by a data access procedure. Entities or persons that want to have access to a dataset that is subject to the GDPR must fill in a data access request form which will be considered by the joint VIB-UZL Data Access Committee (DAC). The DAC will consider the research project for which access to the dataset is requested and check the original ICF under which the patient samples were collected and verify whether the goal of the proposed research is compatible with the patient’s consent. When access to a dataset is granted, a data transfer agreement will be made that will include the necessary conditions to ensure compliance with the GDPR.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007481 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00008203777 bam 3.6 GB
EGAF00008203778 fastq.gz 179.0 MB
EGAF00008203779 fastq.gz 183.5 MB
EGAF00008203780 fastq.gz 177.5 MB
EGAF00008203781 fastq.gz 182.1 MB
EGAF00008203782 fastq.gz 189.3 MB
EGAF00008203783 fastq.gz 195.5 MB
EGAF00008203784 fastq.gz 182.7 MB
EGAF00008203785 fastq.gz 189.2 MB
EGAF00008203786 fastq.gz 41.3 GB
EGAF00008203787 fastq.gz 43.1 GB
EGAF00008203788 fastq.gz 168.2 MB
EGAF00008203789 fastq.gz 172.2 MB
EGAF00008203790 fastq.gz 166.5 MB
EGAF00008203791 fastq.gz 170.6 MB
EGAF00008203792 fastq.gz 177.8 MB
EGAF00008203793 fastq.gz 183.3 MB
EGAF00008203794 fastq.gz 171.7 MB
EGAF00008203795 fastq.gz 177.5 MB
EGAF00008203796 fastq.gz 163.1 MB
EGAF00008203797 fastq.gz 167.9 MB
EGAF00008203798 fastq.gz 161.3 MB
EGAF00008203799 fastq.gz 166.0 MB
EGAF00008203800 fastq.gz 172.3 MB
EGAF00008203801 fastq.gz 178.5 MB
EGAF00008203802 fastq.gz 165.8 MB
EGAF00008203803 fastq.gz 172.3 MB
EGAF00008203804 fastq.gz 161.7 MB
EGAF00008203805 fastq.gz 167.1 MB
EGAF00008203806 fastq.gz 158.9 MB
EGAF00008203807 fastq.gz 164.3 MB
EGAF00008203808 fastq.gz 171.2 MB
EGAF00008203809 fastq.gz 177.8 MB
EGAF00008203810 fastq.gz 164.1 MB
EGAF00008203811 fastq.gz 171.1 MB
EGAF00008203812 fastq.gz 161.5 MB
EGAF00008203813 fastq.gz 166.4 MB
EGAF00008203814 fastq.gz 158.6 MB
EGAF00008203815 fastq.gz 163.1 MB
EGAF00008203816 fastq.gz 170.5 MB
EGAF00008203817 fastq.gz 177.0 MB
EGAF00008203818 fastq.gz 163.4 MB
EGAF00008203819 fastq.gz 169.7 MB
EGAF00008203833 bai 6.2 MB
44 Files (95.0 GB)