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Evaluating gene expression in aggressive B-cell lymphoma using a quantitative nuclease protection assay

Diffuse large B-cell lymphoma (DLBCL) is the most common non-Hodgkin lymphoma (NHL), comprising 25-30% of all NHL in developed countries with an annual incidence in the USA of 7 cases/100000 persons/year. Collectively, DLBCL is classified based on a common morphological appearance of diffuse growth of large transformed B-cells, immunophenotype, high proliferation rate and aggressive behaviour. Despite these similarities, DLBCLs are a heterogeneous collection of malignancies with distinct clinical and molecular characteristics that do not always correlate with immunohistological features. This gene expression dataset includes transcriptomes of ABC-DLBCLs and of GCB-DLBCLs where cell of origin is determined by the HTG-EdgeSeq quantitative nuclease protection assay. Also included are clonality results from BCR profiling from high-grade B-cell lymphomas sequenced using a NOVA sequencer

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Data Access Agreement for the Berardi Group

Data will be available to qualified investigators upon request

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007479 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00008204536 fastq.gz 3.9 GB
EGAF00008204537 fastq.gz 4.0 GB
EGAF00008204538 fastq.gz 2.4 GB
EGAF00008204539 fastq.gz 2.4 GB
EGAF00008204540 fastq.gz 4.7 GB
EGAF00008204541 fastq.gz 4.9 GB
EGAF00008204542 fastq.gz 5.0 GB
EGAF00008204543 fastq.gz 5.3 GB
EGAF00008204544 fastq.gz 3.7 GB
EGAF00008204545 fastq.gz 3.9 GB
EGAF00008204546 fastq.gz 2.5 GB
EGAF00008204547 fastq.gz 2.5 GB
EGAF00008204548 fastq.gz 4.4 GB
EGAF00008204549 fastq.gz 4.6 GB
EGAF00008204550 fastq.gz 5.1 GB
EGAF00008204551 fastq.gz 5.2 GB
EGAF00008204552 fastq.gz 4.8 GB
EGAF00008204553 fastq.gz 5.0 GB
EGAF00008204554 fastq.gz 4.8 GB
EGAF00008204555 fastq.gz 5.0 GB
20 Files (84.0 GB)