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Single-cell RNA sequencing of CML patients

This dataset contains 15 single-cell RNA sequencing samples from 6 CML patients before and after TKI-cessation. The raw data is available as fastq files.

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Hematology Research Unit Helsinki Data access policy

The proposed research use must be consistent with the specific data use limitation for this study. Data use requests will be evaluated based on the Helsinki University Hospital ethics committee permit concerning the samples.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005044 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00008286969 fastq.gz 204.9 MB
EGAF00008286970 fastq.gz 516.1 MB
EGAF00008286971 fastq.gz 1.2 GB
EGAF00008286972 fastq.gz 204.1 MB
EGAF00008286973 fastq.gz 513.7 MB
EGAF00008286974 fastq.gz 1.2 GB
EGAF00008286975 fastq.gz 322.6 MB
EGAF00008286976 fastq.gz 854.1 MB
EGAF00008286977 fastq.gz 2.2 GB
EGAF00008286978 fastq.gz 323.1 MB
EGAF00008286979 fastq.gz 867.3 MB
EGAF00008286980 fastq.gz 2.3 GB
EGAF00008286981 fastq.gz 241.6 MB
EGAF00008286982 fastq.gz 737.5 MB
EGAF00008286983 fastq.gz 1.8 GB
EGAF00008286984 fastq.gz 240.7 MB
EGAF00008286985 fastq.gz 732.3 MB
EGAF00008286986 fastq.gz 1.8 GB
EGAF00008286987 fastq.gz 397.9 MB
EGAF00008286988 fastq.gz 1.2 GB
EGAF00008286989 fastq.gz 3.1 GB
EGAF00008286990 fastq.gz 393.4 MB
EGAF00008286991 fastq.gz 1.2 GB
EGAF00008286992 fastq.gz 3.3 GB
EGAF00008286993 fastq.gz 348.8 MB
EGAF00008286994 fastq.gz 1.0 GB
EGAF00008286995 fastq.gz 2.6 GB
EGAF00008286996 fastq.gz 347.5 MB
EGAF00008286997 fastq.gz 1.0 GB
EGAF00008286998 fastq.gz 2.7 GB
EGAF00008286999 fastq.gz 502.4 MB
EGAF00008287000 fastq.gz 1.4 GB
EGAF00008287001 fastq.gz 3.6 GB
EGAF00008287002 fastq.gz 514.4 MB
EGAF00008287003 fastq.gz 1.4 GB
EGAF00008287004 fastq.gz 3.8 GB
EGAF00008287005 fastq.gz 211.2 MB
EGAF00008287006 fastq.gz 626.8 MB
EGAF00008287007 fastq.gz 1.5 GB
EGAF00008287008 fastq.gz 209.9 MB
EGAF00008287009 fastq.gz 623.1 MB
EGAF00008287010 fastq.gz 1.5 GB
EGAF00008287011 fastq.gz 283.5 MB
EGAF00008287012 fastq.gz 835.1 MB
EGAF00008287013 fastq.gz 2.0 GB
EGAF00008287014 fastq.gz 283.5 MB
EGAF00008287015 fastq.gz 832.4 MB
EGAF00008287016 fastq.gz 2.0 GB
EGAF00008287017 fastq.gz 467.8 MB
EGAF00008287018 fastq.gz 1.4 GB
EGAF00008287019 fastq.gz 3.6 GB
EGAF00008287020 fastq.gz 470.9 MB
EGAF00008287021 fastq.gz 1.4 GB
EGAF00008287022 fastq.gz 3.8 GB
EGAF00008287023 fastq.gz 561.6 MB
EGAF00008287024 fastq.gz 1.8 GB
EGAF00008287025 fastq.gz 4.7 GB
EGAF00008287026 fastq.gz 563.9 MB
EGAF00008287027 fastq.gz 1.8 GB
EGAF00008287028 fastq.gz 4.9 GB
EGAF00008287029 fastq.gz 754.1 MB
EGAF00008287030 fastq.gz 2.2 GB
EGAF00008287031 fastq.gz 5.8 GB
EGAF00008287032 fastq.gz 757.9 MB
EGAF00008287033 fastq.gz 2.3 GB
EGAF00008287034 fastq.gz 6.2 GB
EGAF00008287035 fastq.gz 572.7 MB
EGAF00008287036 fastq.gz 1.6 GB
EGAF00008287037 fastq.gz 4.2 GB
EGAF00008287038 fastq.gz 573.3 MB
EGAF00008287039 fastq.gz 1.7 GB
EGAF00008287040 fastq.gz 4.4 GB
EGAF00008287041 fastq.gz 136.5 MB
EGAF00008287042 fastq.gz 363.3 MB
EGAF00008287043 fastq.gz 914.5 MB
EGAF00008287044 fastq.gz 137.9 MB
EGAF00008287045 fastq.gz 367.5 MB
EGAF00008287046 fastq.gz 963.6 MB
EGAF00008287047 fastq.gz 187.3 MB
EGAF00008287048 fastq.gz 544.6 MB
EGAF00008287049 fastq.gz 1.4 GB
EGAF00008287050 fastq.gz 188.4 MB
EGAF00008287051 fastq.gz 548.7 MB
EGAF00008287052 fastq.gz 1.4 GB
EGAF00008287053 fastq.gz 188.5 MB
EGAF00008287054 fastq.gz 510.9 MB
EGAF00008287055 fastq.gz 1.3 GB
EGAF00008287056 fastq.gz 189.4 MB
EGAF00008287057 fastq.gz 515.0 MB
EGAF00008287058 fastq.gz 1.3 GB
EGAF00008287059 fastq.gz 179.6 MB
EGAF00008287060 fastq.gz 455.0 MB
EGAF00008287061 fastq.gz 1.2 GB
EGAF00008287062 fastq.gz 178.1 MB
EGAF00008287063 fastq.gz 460.2 MB
EGAF00008287064 fastq.gz 1.2 GB
EGAF00008287065 fastq.gz 240.0 MB
EGAF00008287066 fastq.gz 649.1 MB
EGAF00008287067 fastq.gz 1.6 GB
EGAF00008287068 fastq.gz 238.9 MB
EGAF00008287069 fastq.gz 644.8 MB
EGAF00008287070 fastq.gz 1.6 GB
EGAF00008287071 fastq.gz 328.2 MB
EGAF00008287072 fastq.gz 994.0 MB
EGAF00008287073 fastq.gz 2.4 GB
EGAF00008287074 fastq.gz 326.7 MB
EGAF00008287075 fastq.gz 987.7 MB
EGAF00008287076 fastq.gz 2.4 GB
EGAF00008287077 fastq.gz 345.0 MB
EGAF00008287078 fastq.gz 936.9 MB
EGAF00008287079 fastq.gz 2.2 GB
EGAF00008287080 fastq.gz 342.6 MB
EGAF00008287081 fastq.gz 930.5 MB
EGAF00008287082 fastq.gz 2.2 GB
EGAF00008287083 fastq.gz 301.2 MB
EGAF00008287084 fastq.gz 836.3 MB
EGAF00008287085 fastq.gz 2.1 GB
EGAF00008287086 fastq.gz 299.1 MB
EGAF00008287087 fastq.gz 831.2 MB
EGAF00008287088 fastq.gz 2.1 GB
EGAF00008287089 fastq.gz 578.5 MB
EGAF00008287090 fastq.gz 1.7 GB
EGAF00008287091 fastq.gz 4.1 GB
EGAF00008287092 fastq.gz 573.7 MB
EGAF00008287093 fastq.gz 1.7 GB
EGAF00008287094 fastq.gz 4.0 GB
EGAF00008287095 fastq.gz 597.6 MB
EGAF00008287096 fastq.gz 1.9 GB
EGAF00008287097 fastq.gz 4.6 GB
EGAF00008287098 fastq.gz 597.0 MB
EGAF00008287099 fastq.gz 1.9 GB
EGAF00008287100 fastq.gz 4.6 GB
EGAF00008287101 fastq.gz 745.7 MB
EGAF00008287102 fastq.gz 2.5 GB
EGAF00008287103 fastq.gz 6.1 GB
EGAF00008287104 fastq.gz 737.2 MB
EGAF00008287105 fastq.gz 2.5 GB
EGAF00008287106 fastq.gz 6.1 GB
EGAF00008287107 fastq.gz 469.0 MB
EGAF00008287108 fastq.gz 1.4 GB
EGAF00008287109 fastq.gz 3.3 GB
EGAF00008287110 fastq.gz 467.1 MB
EGAF00008287111 fastq.gz 1.4 GB
EGAF00008287112 fastq.gz 3.3 GB
EGAF00008287113 fastq.gz 549.2 MB
EGAF00008287114 fastq.gz 1.9 GB
EGAF00008287115 fastq.gz 4.6 GB
EGAF00008287116 fastq.gz 545.7 MB
EGAF00008287117 fastq.gz 1.8 GB
EGAF00008287118 fastq.gz 4.5 GB
EGAF00008287119 fastq.gz 728.0 MB
EGAF00008287120 fastq.gz 2.3 GB
EGAF00008287121 fastq.gz 5.5 GB
EGAF00008287122 fastq.gz 726.2 MB
EGAF00008287123 fastq.gz 2.2 GB
EGAF00008287124 fastq.gz 5.5 GB
EGAF00008287125 fastq.gz 333.0 MB
EGAF00008287126 fastq.gz 974.2 MB
EGAF00008287127 fastq.gz 2.4 GB
EGAF00008287128 fastq.gz 331.8 MB
EGAF00008287129 fastq.gz 969.6 MB
EGAF00008287130 fastq.gz 2.4 GB
EGAF00008287131 fastq.gz 505.0 MB
EGAF00008287132 fastq.gz 1.5 GB
EGAF00008287133 fastq.gz 3.7 GB
EGAF00008287134 fastq.gz 505.8 MB
EGAF00008287135 fastq.gz 1.5 GB
EGAF00008287136 fastq.gz 3.7 GB
EGAF00008287137 fastq.gz 730.0 MB
EGAF00008287138 fastq.gz 2.6 GB
EGAF00008287139 fastq.gz 6.4 GB
EGAF00008287140 fastq.gz 729.7 MB
EGAF00008287141 fastq.gz 2.6 GB
EGAF00008287142 fastq.gz 6.3 GB
EGAF00008287143 fastq.gz 644.5 MB
EGAF00008287144 fastq.gz 1.8 GB
EGAF00008287145 fastq.gz 4.5 GB
EGAF00008287146 fastq.gz 642.0 MB
EGAF00008287147 fastq.gz 1.8 GB
EGAF00008287148 fastq.gz 4.4 GB
EGAF00008287149 fastq.gz 707.5 MB
EGAF00008287150 fastq.gz 2.3 GB
EGAF00008287151 fastq.gz 5.7 GB
EGAF00008287152 fastq.gz 704.8 MB
EGAF00008287153 fastq.gz 2.3 GB
EGAF00008287154 fastq.gz 5.6 GB
EGAF00008287155 fastq.gz 442.7 MB
EGAF00008287156 fastq.gz 1.3 GB
EGAF00008287157 fastq.gz 3.3 GB
EGAF00008287158 fastq.gz 439.5 MB
EGAF00008287159 fastq.gz 1.3 GB
EGAF00008287160 fastq.gz 3.2 GB
EGAF00008287161 fastq.gz 353.0 MB
EGAF00008287162 fastq.gz 1.0 GB
EGAF00008287163 fastq.gz 2.5 GB
EGAF00008287164 fastq.gz 351.7 MB
EGAF00008287165 fastq.gz 219.5 MB
EGAF00008287166 fastq.gz 218.3 MB
EGAF00008287167 fastq.gz 408.5 MB
EGAF00008287168 fastq.gz 404.9 MB
EGAF00008287169 fastq.gz 396.7 MB
EGAF00008287170 fastq.gz 395.0 MB
EGAF00008287171 fastq.gz 474.1 MB
EGAF00008287172 fastq.gz 471.2 MB
EGAF00008287173 fastq.gz 427.5 MB
EGAF00008287174 fastq.gz 424.5 MB
EGAF00008287175 fastq.gz 557.4 MB
EGAF00008287176 fastq.gz 550.0 MB
EGAF00008287177 fastq.gz 583.9 MB
EGAF00008287178 fastq.gz 575.6 MB
EGAF00008287179 fastq.gz 294.0 MB
EGAF00008287180 fastq.gz 974.1 MB
EGAF00008287181 fastq.gz 2.4 GB
EGAF00008287182 fastq.gz 296.7 MB
EGAF00008287183 fastq.gz 983.3 MB
EGAF00008287184 fastq.gz 2.4 GB
EGAF00008287185 fastq.gz 373.4 MB
EGAF00008287186 fastq.gz 1.0 GB
EGAF00008287187 fastq.gz 2.6 GB
EGAF00008287188 fastq.gz 377.2 MB
EGAF00008287189 fastq.gz 1.1 GB
EGAF00008287190 fastq.gz 2.6 GB
EGAF00008287191 fastq.gz 374.5 MB
EGAF00008287192 fastq.gz 1.2 GB
EGAF00008287193 fastq.gz 3.0 GB
EGAF00008287194 fastq.gz 378.0 MB
EGAF00008287195 fastq.gz 1.2 GB
EGAF00008287196 fastq.gz 3.0 GB
EGAF00008287197 fastq.gz 431.2 MB
EGAF00008287198 fastq.gz 1.5 GB
EGAF00008287199 fastq.gz 3.8 GB
EGAF00008287200 fastq.gz 434.9 MB
EGAF00008287201 fastq.gz 1.5 GB
EGAF00008287202 fastq.gz 3.8 GB
EGAF00008287203 fastq.gz 529.4 MB
EGAF00008287204 fastq.gz 1.8 GB
EGAF00008287205 fastq.gz 4.6 GB
EGAF00008287206 fastq.gz 534.5 MB
EGAF00008287207 fastq.gz 1.8 GB
EGAF00008287208 fastq.gz 4.6 GB
EGAF00008287209 fastq.gz 151.9 MB
EGAF00008287210 fastq.gz 492.9 MB
EGAF00008287211 fastq.gz 1.2 GB
EGAF00008287212 fastq.gz 153.3 MB
EGAF00008287213 fastq.gz 498.2 MB
EGAF00008287214 fastq.gz 1.2 GB
EGAF00008287215 fastq.gz 646.9 MB
EGAF00008287216 fastq.gz 2.2 GB
EGAF00008287217 fastq.gz 5.6 GB
EGAF00008287218 fastq.gz 652.9 MB
EGAF00008287219 fastq.gz 530.2 MB
EGAF00008287220 fastq.gz 535.2 MB
EGAF00008287221 fastq.gz 422.1 MB
EGAF00008287222 fastq.gz 424.8 MB
EGAF00008287223 fastq.gz 407.9 MB
EGAF00008287224 fastq.gz 411.3 MB
EGAF00008287225 fastq.gz 548.1 MB
EGAF00008287226 fastq.gz 552.9 MB
EGAF00008287227 fastq.gz 529.3 MB
EGAF00008287228 fastq.gz 534.1 MB
EGAF00008287229 fastq.gz 538.2 MB
EGAF00008287230 fastq.gz 537.1 MB
EGAF00008287231 fastq.gz 465.7 MB
EGAF00008287232 fastq.gz 463.8 MB
EGAF00008287233 fastq.gz 494.6 MB
EGAF00008287234 fastq.gz 495.3 MB
EGAF00008287235 fastq.gz 380.8 MB
EGAF00008287236 fastq.gz 380.6 MB
EGAF00008287237 fastq.gz 543.5 MB
EGAF00008287238 fastq.gz 542.3 MB
EGAF00008287239 fastq.gz 439.2 MB
EGAF00008287240 fastq.gz 438.2 MB
EGAF00008287241 fastq.gz 490.2 MB
EGAF00008287242 fastq.gz 488.9 MB
EGAF00008287243 fastq.gz 595.6 MB
EGAF00008287244 fastq.gz 593.1 MB
EGAF00008287245 fastq.gz 621.8 MB
EGAF00008287246 fastq.gz 621.8 MB
EGAF00008287247 fastq.gz 475.6 MB
EGAF00008287248 fastq.gz 475.0 MB
EGAF00008287249 fastq.gz 426.2 MB
EGAF00008287250 fastq.gz 426.4 MB
EGAF00008287251 fastq.gz 488.5 MB
EGAF00008287252 fastq.gz 486.9 MB
EGAF00008287253 fastq.gz 401.9 MB
EGAF00008287254 fastq.gz 1.3 GB
EGAF00008287255 fastq.gz 3.1 GB
EGAF00008287256 fastq.gz 400.9 MB
EGAF00008287257 fastq.gz 1.3 GB
EGAF00008287258 fastq.gz 3.1 GB
EGAF00008287259 fastq.gz 423.8 MB
EGAF00008287260 fastq.gz 1.3 GB
EGAF00008287261 fastq.gz 3.2 GB
EGAF00008287262 fastq.gz 422.7 MB
EGAF00008287263 fastq.gz 1.3 GB
EGAF00008287264 fastq.gz 3.2 GB
EGAF00008287265 fastq.gz 482.2 MB
EGAF00008287266 fastq.gz 1.5 GB
EGAF00008287267 fastq.gz 3.6 GB
EGAF00008287268 fastq.gz 480.4 MB
EGAF00008287269 fastq.gz 1.5 GB
EGAF00008287270 fastq.gz 3.6 GB
EGAF00008287271 fastq.gz 581.6 MB
EGAF00008287272 fastq.gz 1.8 GB
EGAF00008287273 fastq.gz 4.2 GB
EGAF00008287274 fastq.gz 579.5 MB
EGAF00008287275 fastq.gz 1.8 GB
EGAF00008287276 fastq.gz 4.2 GB
EGAF00008287692 fastq.gz 1.0 GB
EGAF00008287693 fastq.gz 2.4 GB
EGAF00008287694 fastq.gz 630.0 MB
EGAF00008287695 fastq.gz 1.5 GB
EGAF00008287696 fastq.gz 621.8 MB
EGAF00008287697 fastq.gz 1.5 GB
EGAF00008287698 fastq.gz 1.4 GB
EGAF00008287699 fastq.gz 3.3 GB
EGAF00008287700 fastq.gz 1.3 GB
EGAF00008287701 fastq.gz 3.2 GB
EGAF00008287702 fastq.gz 1.3 GB
EGAF00008287703 fastq.gz 3.2 GB
EGAF00008287704 fastq.gz 1.3 GB
EGAF00008287705 fastq.gz 3.2 GB
EGAF00008287706 fastq.gz 1.6 GB
EGAF00008287707 fastq.gz 4.1 GB
EGAF00008287708 fastq.gz 1.6 GB
EGAF00008287709 fastq.gz 4.0 GB
EGAF00008287710 fastq.gz 1.2 GB
EGAF00008287711 fastq.gz 2.9 GB
EGAF00008287712 fastq.gz 1.2 GB
EGAF00008287713 fastq.gz 2.8 GB
EGAF00008287714 fastq.gz 1.4 GB
EGAF00008287715 fastq.gz 3.4 GB
EGAF00008287716 fastq.gz 1.4 GB
EGAF00008287717 fastq.gz 3.4 GB
EGAF00008287718 fastq.gz 1.6 GB
EGAF00008287719 fastq.gz 4.0 GB
EGAF00008287720 fastq.gz 1.6 GB
EGAF00008287721 fastq.gz 4.0 GB
EGAF00008287722 fastq.gz 2.2 GB
EGAF00008287723 fastq.gz 5.6 GB
EGAF00008287724 fastq.gz 1.6 GB
EGAF00008287725 fastq.gz 4.1 GB
EGAF00008287726 fastq.gz 1.6 GB
EGAF00008287727 fastq.gz 4.1 GB
EGAF00008287728 fastq.gz 1.4 GB
EGAF00008287729 fastq.gz 3.6 GB
EGAF00008287730 fastq.gz 1.5 GB
EGAF00008287731 fastq.gz 3.6 GB
EGAF00008287732 fastq.gz 1.3 GB
EGAF00008287733 fastq.gz 3.3 GB
EGAF00008287734 fastq.gz 1.3 GB
EGAF00008287735 fastq.gz 3.3 GB
EGAF00008287736 fastq.gz 2.1 GB
EGAF00008287737 fastq.gz 5.2 GB
EGAF00008287738 fastq.gz 2.1 GB
EGAF00008287739 fastq.gz 5.2 GB
EGAF00008287740 fastq.gz 1.7 GB
EGAF00008287741 fastq.gz 4.2 GB
EGAF00008287742 fastq.gz 1.7 GB
EGAF00008287743 fastq.gz 4.2 GB
EGAF00008287744 fastq.gz 1.9 GB
EGAF00008287745 fastq.gz 4.5 GB
EGAF00008287746 fastq.gz 1.9 GB
EGAF00008287747 fastq.gz 4.5 GB
EGAF00008287748 fastq.gz 1.3 GB
EGAF00008287749 fastq.gz 3.1 GB
EGAF00008287750 fastq.gz 1.3 GB
EGAF00008287751 fastq.gz 3.1 GB
EGAF00008287752 fastq.gz 1.6 GB
EGAF00008287753 fastq.gz 3.8 GB
EGAF00008287754 fastq.gz 1.6 GB
EGAF00008287755 fastq.gz 3.8 GB
EGAF00008287756 fastq.gz 1.2 GB
EGAF00008287757 fastq.gz 2.8 GB
EGAF00008287758 fastq.gz 1.2 GB
EGAF00008287759 fastq.gz 2.8 GB
EGAF00008287760 fastq.gz 1.8 GB
EGAF00008287761 fastq.gz 4.3 GB
EGAF00008287762 fastq.gz 1.8 GB
EGAF00008287763 fastq.gz 4.3 GB
EGAF00008287764 fastq.gz 1.3 GB
EGAF00008287765 fastq.gz 3.2 GB
EGAF00008287766 fastq.gz 1.3 GB
EGAF00008287767 fastq.gz 3.2 GB
EGAF00008287768 fastq.gz 1.7 GB
EGAF00008287769 fastq.gz 4.0 GB
EGAF00008287770 fastq.gz 1.7 GB
EGAF00008287771 fastq.gz 4.0 GB
EGAF00008287772 fastq.gz 1.7 GB
EGAF00008287773 fastq.gz 4.1 GB
EGAF00008287774 fastq.gz 1.7 GB
EGAF00008287775 fastq.gz 4.1 GB
EGAF00008287776 fastq.gz 1.8 GB
EGAF00008287777 fastq.gz 4.3 GB
EGAF00008287778 fastq.gz 1.8 GB
EGAF00008287779 fastq.gz 4.3 GB
EGAF00008287780 fastq.gz 1.3 GB
EGAF00008287781 fastq.gz 3.2 GB
EGAF00008287782 fastq.gz 1.3 GB
EGAF00008287783 fastq.gz 3.2 GB
EGAF00008287784 fastq.gz 1.4 GB
EGAF00008287785 fastq.gz 3.5 GB
EGAF00008287786 fastq.gz 1.4 GB
EGAF00008287787 fastq.gz 3.5 GB
EGAF00008287788 fastq.gz 1.6 GB
EGAF00008287789 fastq.gz 3.8 GB
EGAF00008287790 fastq.gz 1.6 GB
EGAF00008287791 fastq.gz 3.8 GB
408 Files (710.3 GB)