WGS of human colorectal cancer organoid exposed to genotoxic pks+ E. coli
Organoid cultures were exposed to different E.Coli strains and a dye control. In total 25 organoid cultures were whole-genome sequenced using the Novaseq6000 platforms. The data is deposited as .bam format.
- 11/03/2024
- 25 samples
- DAC: EGAC00001001864
- Technology: Illumina NovaSeq 6000
The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes.
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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000212 | Whole Genome Sequencing |
- Added 20 more samples
- Dataset Released
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000086173 | bam | 28.0 GB | ||
| EGAF50000086174 | bam | 27.1 GB | ||
| EGAF50000086175 | bam | 28.2 GB | ||
| EGAF50000086176 | bam | 26.2 GB | ||
| EGAF50000086177 | bam | 29.6 GB | ||
| EGAF50000086872 | bam | 30.3 GB | ||
| EGAF50000086873 | bam | 32.8 GB | ||
| EGAF50000086874 | bam | 28.2 GB | ||
| EGAF50000086875 | bam | 29.3 GB | ||
| EGAF50000086876 | bam | 34.7 GB | ||
| EGAF50000086877 | bam | 30.9 GB | ||
| EGAF50000086878 | bam | 32.2 GB | ||
| EGAF50000086879 | bam | 27.9 GB | ||
| EGAF50000086880 | bam | 33.5 GB | ||
| EGAF50000086881 | bam | 27.9 GB | ||
| EGAF50000086882 | bam | 27.2 GB | ||
| EGAF50000086883 | bam | 26.4 GB | ||
| EGAF50000086884 | bam | 28.9 GB | ||
| EGAF50000086885 | bam | 27.5 GB | ||
| EGAF50000086886 | bam | 27.9 GB | ||
| EGAF50000086887 | bam | 25.2 GB | ||
| EGAF50000086888 | bam | 30.7 GB | ||
| EGAF50000086889 | bam | 34.7 GB | ||
| EGAF50000086890 | bam | 29.5 GB | ||
| EGAF50000086891 | bam | 32.0 GB | ||
| 25 Files (736.6 GB) | ||||