RNA sequencing of primary B-cells infected with Epstein-Barr virus (EBV), treated with heat-inactivated EBV, CpG or BCR-crosslinking in presence or absence of Linrodostat
B cells were isolated from buffy coat preparations of healthy donors using CD19 magnetic beads. B cells were then infected with EBV using spinoculation or activated with heat-inactivated EBV, respectively. Additionally cells were treated with 5ng/ml CpG or a BCR-crosslinking mixture in presence or absence of 10 µM Linrodostat (IDO1 inhibitor). RNA samples were isolated at 2 days post-infection / post-activation and one day 0 control with non-infected B cells was included.
- 16/04/2024
- 36 samples
- DAC: EGAC00001002981
- Technology: Illumina NovaSeq 6000
Data Access Policy of Datasets controlled by MF-DAC
ATTENTION: Please check the following policy and the documents/information to provide in order to get access to the requeted datasets: You can find the governing policy on Zenodo under the link: https://zenodo.org/records/10014705 Please provide all information as requested in the document to the MF-DAC. Additionally, you can find more information about the Data Access Committee of the Medical Faculty of the University of Basel (MF-DAC) under the following link on Zenodo: https://zenodo.org/records/10137776
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001007187 | RNASeq |
- Chacged expected relaease date to earliest possible date. Dataset and teh study should be released now.
- Dataset Released
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00008287548 | fastq.gz | 952.4 MB | ||
| EGAF00008287549 | fastq.gz | 985.3 MB | ||
| EGAF00008287550 | fastq.gz | 953.4 MB | ||
| EGAF00008287551 | fastq.gz | 986.7 MB | ||
| EGAF00008287552 | fastq.gz | 749.4 MB | ||
| EGAF00008287553 | fastq.gz | 784.0 MB | ||
| EGAF00008287554 | fastq.gz | 746.2 MB | ||
| EGAF00008287555 | fastq.gz | 780.7 MB | ||
| EGAF00008287556 | fastq.gz | 977.7 MB | ||
| EGAF00008287557 | fastq.gz | 995.0 MB | ||
| EGAF00008287558 | fastq.gz | 973.6 MB | ||
| EGAF00008287559 | fastq.gz | 990.9 MB | ||
| EGAF00008287560 | fastq.gz | 761.0 MB | ||
| EGAF00008287561 | fastq.gz | 785.2 MB | ||
| EGAF00008287562 | fastq.gz | 759.1 MB | ||
| EGAF00008287563 | fastq.gz | 783.4 MB | ||
| EGAF00008287564 | fastq.gz | 966.0 MB | ||
| EGAF00008287565 | fastq.gz | 1.0 GB | ||
| EGAF00008287566 | fastq.gz | 964.1 MB | ||
| EGAF00008287567 | fastq.gz | 1.0 GB | ||
| EGAF00008287568 | fastq.gz | 808.0 MB | ||
| EGAF00008287569 | fastq.gz | 834.4 MB | ||
| EGAF00008287570 | fastq.gz | 803.8 MB | ||
| EGAF00008287571 | fastq.gz | 830.3 MB | ||
| EGAF00008287572 | fastq.gz | 962.3 MB | ||
| EGAF00008287573 | fastq.gz | 988.3 MB | ||
| EGAF00008287574 | fastq.gz | 960.6 MB | ||
| EGAF00008287575 | fastq.gz | 986.9 MB | ||
| EGAF00008287576 | fastq.gz | 1.3 GB | ||
| EGAF00008287577 | fastq.gz | 1.3 GB | ||
| EGAF00008287578 | fastq.gz | 1.3 GB | ||
| EGAF00008287579 | fastq.gz | 1.3 GB | ||
| EGAF00008287580 | fastq.gz | 975.6 MB | ||
| EGAF00008287581 | fastq.gz | 1.0 GB | ||
| EGAF00008287582 | fastq.gz | 972.2 MB | ||
| EGAF00008287583 | fastq.gz | 1.0 GB | ||
| EGAF00008287584 | fastq.gz | 825.6 MB | ||
| EGAF00008287585 | fastq.gz | 862.5 MB | ||
| EGAF00008287586 | fastq.gz | 822.5 MB | ||
| EGAF00008287587 | fastq.gz | 859.2 MB | ||
| EGAF00008287588 | fastq.gz | 862.6 MB | ||
| EGAF00008287589 | fastq.gz | 906.3 MB | ||
| EGAF00008287590 | fastq.gz | 859.0 MB | ||
| EGAF00008287591 | fastq.gz | 902.4 MB | ||
| EGAF00008287592 | fastq.gz | 864.8 MB | ||
| EGAF00008287593 | fastq.gz | 898.6 MB | ||
| EGAF00008287594 | fastq.gz | 861.3 MB | ||
| EGAF00008287595 | fastq.gz | 895.0 MB | ||
| EGAF00008287596 | fastq.gz | 677.2 MB | ||
| EGAF00008287597 | fastq.gz | 699.2 MB | ||
| EGAF00008287598 | fastq.gz | 676.5 MB | ||
| EGAF00008287599 | fastq.gz | 698.7 MB | ||
| EGAF00008287600 | fastq.gz | 789.6 MB | ||
| EGAF00008287601 | fastq.gz | 806.6 MB | ||
| EGAF00008287602 | fastq.gz | 789.4 MB | ||
| EGAF00008287603 | fastq.gz | 806.3 MB | ||
| EGAF00008287604 | fastq.gz | 670.8 MB | ||
| EGAF00008287605 | fastq.gz | 701.3 MB | ||
| EGAF00008287606 | fastq.gz | 667.6 MB | ||
| EGAF00008287607 | fastq.gz | 697.9 MB | ||
| EGAF00008287608 | fastq.gz | 1.0 GB | ||
| EGAF00008287609 | fastq.gz | 1.1 GB | ||
| EGAF00008287610 | fastq.gz | 1.0 GB | ||
| EGAF00008287611 | fastq.gz | 1.1 GB | ||
| EGAF00008287612 | fastq.gz | 957.7 MB | ||
| EGAF00008287613 | fastq.gz | 990.2 MB | ||
| EGAF00008287614 | fastq.gz | 953.7 MB | ||
| EGAF00008287615 | fastq.gz | 986.1 MB | ||
| EGAF00008287616 | fastq.gz | 900.9 MB | ||
| EGAF00008287617 | fastq.gz | 929.9 MB | ||
| EGAF00008287618 | fastq.gz | 899.1 MB | ||
| EGAF00008287619 | fastq.gz | 928.2 MB | ||
| EGAF00008287620 | fastq.gz | 923.1 MB | ||
| EGAF00008287621 | fastq.gz | 971.6 MB | ||
| EGAF00008287622 | fastq.gz | 921.3 MB | ||
| EGAF00008287623 | fastq.gz | 970.0 MB | ||
| EGAF00008287624 | fastq.gz | 822.8 MB | ||
| EGAF00008287625 | fastq.gz | 847.5 MB | ||
| EGAF00008287626 | fastq.gz | 820.6 MB | ||
| EGAF00008287627 | fastq.gz | 845.4 MB | ||
| EGAF00008287628 | fastq.gz | 1.1 GB | ||
| EGAF00008287629 | fastq.gz | 1.1 GB | ||
| EGAF00008287630 | fastq.gz | 1.1 GB | ||
| EGAF00008287631 | fastq.gz | 1.1 GB | ||
| EGAF00008287632 | fastq.gz | 861.1 MB | ||
| EGAF00008287633 | fastq.gz | 880.2 MB | ||
| EGAF00008287634 | fastq.gz | 858.2 MB | ||
| EGAF00008287635 | fastq.gz | 877.3 MB | ||
| EGAF00008287636 | fastq.gz | 1.0 GB | ||
| EGAF00008287637 | fastq.gz | 1.1 GB | ||
| EGAF00008287638 | fastq.gz | 1.0 GB | ||
| EGAF00008287639 | fastq.gz | 1.1 GB | ||
| EGAF00008287640 | fastq.gz | 922.2 MB | ||
| EGAF00008287641 | fastq.gz | 948.3 MB | ||
| EGAF00008287642 | fastq.gz | 918.3 MB | ||
| EGAF00008287643 | fastq.gz | 944.5 MB | ||
| EGAF00008287644 | fastq.gz | 1.0 GB | ||
| EGAF00008287645 | fastq.gz | 1.0 GB | ||
| EGAF00008287646 | fastq.gz | 1.0 GB | ||
| EGAF00008287647 | fastq.gz | 1.0 GB | ||
| EGAF00008287648 | fastq.gz | 663.9 MB | ||
| EGAF00008287649 | fastq.gz | 690.4 MB | ||
| EGAF00008287650 | fastq.gz | 661.9 MB | ||
| EGAF00008287651 | fastq.gz | 688.3 MB | ||
| EGAF00008287652 | fastq.gz | 881.0 MB | ||
| EGAF00008287653 | fastq.gz | 914.6 MB | ||
| EGAF00008287654 | fastq.gz | 882.1 MB | ||
| EGAF00008287655 | fastq.gz | 915.7 MB | ||
| EGAF00008287656 | fastq.gz | 636.0 MB | ||
| EGAF00008287657 | fastq.gz | 661.6 MB | ||
| EGAF00008287658 | fastq.gz | 634.5 MB | ||
| EGAF00008287659 | fastq.gz | 659.8 MB | ||
| EGAF00008287660 | fastq.gz | 716.9 MB | ||
| EGAF00008287661 | fastq.gz | 734.3 MB | ||
| EGAF00008287662 | fastq.gz | 716.4 MB | ||
| EGAF00008287663 | fastq.gz | 734.0 MB | ||
| EGAF00008287664 | fastq.gz | 683.1 MB | ||
| EGAF00008287665 | fastq.gz | 717.9 MB | ||
| EGAF00008287666 | fastq.gz | 681.0 MB | ||
| EGAF00008287667 | fastq.gz | 715.6 MB | ||
| EGAF00008287668 | fastq.gz | 817.0 MB | ||
| EGAF00008287669 | fastq.gz | 859.5 MB | ||
| EGAF00008287670 | fastq.gz | 814.5 MB | ||
| EGAF00008287671 | fastq.gz | 856.9 MB | ||
| EGAF00008287672 | fastq.gz | 1.0 GB | ||
| EGAF00008287673 | fastq.gz | 1.1 GB | ||
| EGAF00008287674 | fastq.gz | 1.0 GB | ||
| EGAF00008287675 | fastq.gz | 1.1 GB | ||
| EGAF00008287676 | fastq.gz | 1.0 GB | ||
| EGAF00008287677 | fastq.gz | 1.1 GB | ||
| EGAF00008287678 | fastq.gz | 1.0 GB | ||
| EGAF00008287679 | fastq.gz | 1.1 GB | ||
| EGAF00008287680 | fastq.gz | 735.6 MB | ||
| EGAF00008287681 | fastq.gz | 762.0 MB | ||
| EGAF00008287682 | fastq.gz | 732.4 MB | ||
| EGAF00008287683 | fastq.gz | 758.7 MB | ||
| EGAF00008287684 | fastq.gz | 846.1 MB | ||
| EGAF00008287685 | fastq.gz | 868.0 MB | ||
| EGAF00008287686 | fastq.gz | 850.8 MB | ||
| EGAF00008287687 | fastq.gz | 872.9 MB | ||
| EGAF00008287688 | fastq.gz | 704.8 MB | ||
| EGAF00008287689 | fastq.gz | 717.1 MB | ||
| EGAF00008287690 | fastq.gz | 701.1 MB | ||
| EGAF00008287691 | fastq.gz | 713.2 MB | ||
| 144 Files (127.5 GB) | ||||