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Whole genome sequencing of preneoplasia lung adenocarcinoma

Whole genome sequencing of 42 pulmonary samples including lung preneoplasia atypical adenomatous hyperplasia (AAH, N=5), adenocarcinoma in situ (AIS, N=7), minimally invasive adenocarcinoma (MIA, N=6) and invasive lung adenocarcinoma (ADC, N=8) and adjacent lung tissues (Normal, N=16).

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This Data Access Agreement (“Agreement”), effective as of the Jan, 24, 2019, is by and between The University of Texas M. D. Anderson Cancer Center, an institution of The University of Texas System and an agency of the State of Texas, with an address at 1515 Holcombe Boulevard, Houston, Texas 77030.

In consideration of the mutual promises and covenants herein, and for other good and valuable consideration, the receipt and sufficiency of which is hereby acknowledged, the Parties agree as follows: 1. The Data will be used solely for the Research by Recipient Investigator at Recipient, and may not be transferred to any other investigator or to any third party without prior written permission from Provider. The Material may not be used for any purpose other than the Research, including without limitation for any commercial purpose or for research in human subjects (including, without limitation, in diagnostic testing). 2. Neither Recipient nor Recipient Investigator shall disclose Data to any person or party other than the Recipient Investigator hereunder without Provider’s prior written consent. 3. The Data will be used in compliance with all applicable laws, regulations, and guidelines applicable to the Data, including without limitation any applicable export controls. 4. In any publication resulting from use of the Data, Recipient and Recipient Investigator shall acknowledge Department of Genomic Medicine (“Provider Investigator”) and Provider as the provider of the Data. 5. This Agreement shall be effective as of the Effective Date and shall remain effective until completion of the Research. Either Party may terminate this Agreement with or without cause upon thirty (30) days’ written notice to the other Party. Upon expiration or termination of this Agreement for any reason, Recipient shall destroy all Data received pursuant to this Agreement. 6. Any notice permitted or required as provided for herein shall be in writing and to the contact and address as noted below or as may be provided by either party to the other in writing from time to time. 7. In the event Protected Health Information (“PHI”), as defined by the federal Health Insurance Portability and Accountability Act of 1996 (“HIPAA”), as amended, is inadvertently created, accessed by, and/or disclosed to Recipient in connection with this Agreement, Recipient will immediately notify the Provider and will return to Provider or destroy such PHI, in accordance with the Provider’s instructions. Pending return or destruction of any PHI, Recipient shall maintain the confidentiality of all Data (including the PHI) and use appropriate safeguards to prevent access to, use, or disclosure of Data (including the PHI). 8. PROVIDER MAKES NO REPRESENTATION OR WARRANTY CONCERNING THE MATERIAL, INCLUDING WITHOUT LIMITATION, WARRANTY OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE OR ANY OTHER WARRANTY, EXPRESS OR IMPLIED. 9. Recipient Investigator and Recipient accept all liability for any use of the Data and for any loss,claim, or damage which may arise from or in connection with this Agreement or the use, handling or storage of the Data and in no event shall Provider or Provider Investigator be liable for any such use, loss, claim or damage.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000272 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000094371 bam 38.3 GB
EGAF50000094372 bam 201.2 GB
EGAF50000094373 bam 15.6 GB
EGAF50000094374 bam 189.2 GB
EGAF50000094375 bam 266.0 GB
EGAF50000094376 bam 256.6 GB
EGAF50000094377 bam 298.4 GB
EGAF50000094378 bam 297.6 GB
EGAF50000094379 bam 261.2 GB
EGAF50000094380 bam 207.6 GB
EGAF50000094381 bam 151.0 GB
EGAF50000094382 bam 219.6 GB
EGAF50000094383 bam 252.5 GB
EGAF50000094384 bam 262.9 GB
EGAF50000094385 bam 292.6 GB
EGAF50000094386 bam 290.7 GB
EGAF50000094387 bam 280.1 GB
EGAF50000094388 bam 334.2 GB
EGAF50000094389 bam 269.0 GB
EGAF50000094390 bam 270.0 GB
EGAF50000094391 bam 257.1 GB
EGAF50000094392 bam 57.0 GB
EGAF50000094394 bam 273.2 GB
EGAF50000094397 bam 265.2 GB
EGAF50000094398 bam 269.9 GB
EGAF50000094399 bam 287.9 GB
EGAF50000094400 bam 299.9 GB
EGAF50000094401 bam 286.7 GB
EGAF50000094402 bam 215.0 GB
EGAF50000094403 bam 261.4 GB
EGAF50000094404 bam 300.1 GB
EGAF50000094405 bam 319.6 GB
EGAF50000094407 bam 300.6 GB
EGAF50000094410 bam 287.7 GB
EGAF50000094414 bam 300.9 GB
EGAF50000094417 bam 274.7 GB
EGAF50000094419 bam 99.5 GB
EGAF50000094421 bam 68.0 GB
EGAF50000094422 bam 16.7 GB
EGAF50000094424 bam 200.6 GB
EGAF50000094425 bam 251.6 GB
EGAF50000094426 bam 207.0 GB
EGAF50000094472 csv 1.3 kB
43 Files (9.8 TB)