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Whole exome sequencing of preneoplasia lung adenocarcinoma

Multi-region exome sequencing of 271 pulmonary nodules and matched adjacent lung tissue including lung preneoplasia atypical adenomatous hyperplasia (AAH, N=49), adenocarcinoma in situ (AIS, N=42), minimally invasive adenocarcinoma (MIA, N=37), invasive lung adenocarcinoma (ADC, N=86) and adjacent lung tissues (Normal, N=57).

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This Data Access Agreement (“Agreement”), effective as of the Jan, 24, 2019, is by and between The University of Texas M. D. Anderson Cancer Center, an institution of The University of Texas System and an agency of the State of Texas, with an address at 1515 Holcombe Boulevard, Houston, Texas 77030.

In consideration of the mutual promises and covenants herein, and for other good and valuable consideration, the receipt and sufficiency of which is hereby acknowledged, the Parties agree as follows: 1. The Data will be used solely for the Research by Recipient Investigator at Recipient, and may not be transferred to any other investigator or to any third party without prior written permission from Provider. The Material may not be used for any purpose other than the Research, including without limitation for any commercial purpose or for research in human subjects (including, without limitation, in diagnostic testing). 2. Neither Recipient nor Recipient Investigator shall disclose Data to any person or party other than the Recipient Investigator hereunder without Provider’s prior written consent. 3. The Data will be used in compliance with all applicable laws, regulations, and guidelines applicable to the Data, including without limitation any applicable export controls. 4. In any publication resulting from use of the Data, Recipient and Recipient Investigator shall acknowledge Department of Genomic Medicine (“Provider Investigator”) and Provider as the provider of the Data. 5. This Agreement shall be effective as of the Effective Date and shall remain effective until completion of the Research. Either Party may terminate this Agreement with or without cause upon thirty (30) days’ written notice to the other Party. Upon expiration or termination of this Agreement for any reason, Recipient shall destroy all Data received pursuant to this Agreement. 6. Any notice permitted or required as provided for herein shall be in writing and to the contact and address as noted below or as may be provided by either party to the other in writing from time to time. 7. In the event Protected Health Information (“PHI”), as defined by the federal Health Insurance Portability and Accountability Act of 1996 (“HIPAA”), as amended, is inadvertently created, accessed by, and/or disclosed to Recipient in connection with this Agreement, Recipient will immediately notify the Provider and will return to Provider or destroy such PHI, in accordance with the Provider’s instructions. Pending return or destruction of any PHI, Recipient shall maintain the confidentiality of all Data (including the PHI) and use appropriate safeguards to prevent access to, use, or disclosure of Data (including the PHI). 8. PROVIDER MAKES NO REPRESENTATION OR WARRANTY CONCERNING THE MATERIAL, INCLUDING WITHOUT LIMITATION, WARRANTY OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE OR ANY OTHER WARRANTY, EXPRESS OR IMPLIED. 9. Recipient Investigator and Recipient accept all liability for any use of the Data and for any loss,claim, or damage which may arise from or in connection with this Agreement or the use, handling or storage of the Data and in no event shall Provider or Provider Investigator be liable for any such use, loss, claim or damage.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000270 Exome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000094393 bam 95.6 GB
EGAF50000094395 bam 86.0 GB
EGAF50000094396 bam 66.6 GB
EGAF50000094406 bam 90.3 GB
EGAF50000094408 bam 60.0 GB
EGAF50000094409 bam 67.1 GB
EGAF50000094411 bam 68.3 GB
EGAF50000094412 bam 88.6 GB
EGAF50000094413 bam 105.0 GB
EGAF50000094415 bam 70.9 GB
EGAF50000094416 bam 69.6 GB
EGAF50000094418 bam 66.3 GB
EGAF50000094420 bam 67.7 GB
EGAF50000094423 bam 96.3 GB
EGAF50000094427 bam 121.4 GB
EGAF50000094428 bam 76.8 GB
EGAF50000094429 bam 49.0 GB
EGAF50000094430 bam 81.0 GB
EGAF50000094431 bam 87.0 GB
EGAF50000094432 bam 66.2 GB
EGAF50000094433 bam 91.5 GB
EGAF50000094434 bam 53.5 GB
EGAF50000094435 bam 85.4 GB
EGAF50000094436 bam 62.4 GB
EGAF50000094437 bam 102.1 GB
EGAF50000094438 bam 66.6 GB
EGAF50000094439 bam 99.9 GB
EGAF50000094440 bam 52.9 GB
EGAF50000094441 bam 79.6 GB
EGAF50000094442 bam 68.6 GB
EGAF50000094443 bam 86.4 GB
EGAF50000094444 bam 61.7 GB
EGAF50000094445 bam 77.7 GB
EGAF50000094446 bam 77.4 GB
EGAF50000094447 bam 66.5 GB
EGAF50000094448 bam 81.6 GB
EGAF50000094449 bam 67.4 GB
EGAF50000094450 bam 71.2 GB
EGAF50000094451 bam 55.4 GB
EGAF50000094452 bam 69.0 GB
EGAF50000094453 bam 73.3 GB
EGAF50000094454 bam 77.4 GB
EGAF50000094455 bam 75.6 GB
EGAF50000094456 bam 68.3 GB
EGAF50000094457 bam 53.5 GB
EGAF50000094458 bam 76.1 GB
EGAF50000094459 bam 42.8 GB
EGAF50000094460 bam 58.3 GB
EGAF50000094461 bam 54.5 GB
EGAF50000094462 bam 91.3 GB
EGAF50000094463 bam 94.4 GB
EGAF50000094464 bam 84.9 GB
EGAF50000094465 bam 64.6 GB
EGAF50000094466 bam 42.0 GB
EGAF50000094467 bam 70.2 GB
EGAF50000094468 bam 90.1 GB
EGAF50000094469 bam 69.6 GB
EGAF50000094470 csv 7.5 kB
EGAF50000094473 bam 86.6 GB
EGAF50000094474 bam 91.6 GB
EGAF50000094475 bam 76.8 GB
EGAF50000094476 bam 87.9 GB
EGAF50000094477 bam 95.2 GB
EGAF50000094478 bam 82.3 GB
EGAF50000094479 bam 115.0 GB
EGAF50000094480 bam 82.3 GB
EGAF50000094481 bam 84.9 GB
EGAF50000094482 bam 82.3 GB
EGAF50000094483 bam 79.3 GB
EGAF50000094484 bam 102.8 GB
EGAF50000094485 bam 27.1 GB
EGAF50000094486 bam 97.0 GB
EGAF50000094487 bam 69.5 GB
EGAF50000094488 bam 80.6 GB
EGAF50000094489 bam 77.4 GB
EGAF50000094490 bam 88.1 GB
EGAF50000094491 bam 68.6 GB
EGAF50000094492 bam 94.5 GB
EGAF50000094493 bam 72.3 GB
EGAF50000094494 bam 72.4 GB
EGAF50000094495 bam 63.2 GB
EGAF50000094496 bam 90.2 GB
EGAF50000094497 bam 81.2 GB
EGAF50000094498 bam 64.5 GB
EGAF50000094499 bam 75.6 GB
EGAF50000094500 bam 74.9 GB
EGAF50000094501 bam 64.8 GB
EGAF50000094502 bam 71.6 GB
EGAF50000094503 bam 70.9 GB
EGAF50000094504 bam 97.2 GB
EGAF50000094505 bam 75.1 GB
EGAF50000094506 bam 59.7 GB
EGAF50000094507 bam 64.6 GB
EGAF50000094508 bam 30.2 GB
EGAF50000094509 bam 79.5 GB
EGAF50000094510 bam 84.6 GB
EGAF50000094511 bam 28.3 GB
EGAF50000094512 bam 91.0 GB
EGAF50000094513 bam 52.5 GB
EGAF50000094514 bam 89.9 GB
EGAF50000094515 bam 80.9 GB
EGAF50000094516 bam 71.8 GB
EGAF50000094517 bam 76.4 GB
EGAF50000094518 bam 65.5 GB
EGAF50000094519 bam 81.5 GB
EGAF50000094520 bam 67.9 GB
EGAF50000094521 bam 86.4 GB
EGAF50000094522 bam 77.9 GB
EGAF50000094523 bam 54.1 GB
EGAF50000094524 bam 66.1 GB
EGAF50000094525 bam 77.8 GB
EGAF50000094526 bam 42.5 GB
EGAF50000094527 bam 89.3 GB
EGAF50000094528 bam 45.0 GB
EGAF50000094529 bam 77.4 GB
EGAF50000094530 bam 60.2 GB
EGAF50000094531 bam 75.1 GB
EGAF50000094532 bam 89.5 GB
EGAF50000094533 bam 74.9 GB
EGAF50000094534 bam 83.5 GB
EGAF50000094535 bam 44.7 GB
EGAF50000094536 bam 70.3 GB
EGAF50000094537 bam 61.8 GB
EGAF50000094538 bam 34.7 GB
EGAF50000094539 bam 75.7 GB
EGAF50000094540 bam 42.3 GB
EGAF50000094541 bam 85.0 GB
EGAF50000094542 bam 77.6 GB
EGAF50000094543 bam 72.7 GB
EGAF50000094544 bam 68.6 GB
EGAF50000094545 bam 84.3 GB
EGAF50000094546 bam 96.2 GB
EGAF50000094547 bam 66.6 GB
EGAF50000094548 bam 80.4 GB
EGAF50000094549 bam 86.5 GB
EGAF50000094550 bam 61.4 GB
EGAF50000094551 bam 67.5 GB
EGAF50000094552 bam 79.2 GB
EGAF50000094553 bam 84.9 GB
EGAF50000094554 bam 98.8 GB
EGAF50000094555 bam 45.7 GB
EGAF50000094556 bam 81.2 GB
EGAF50000094557 bam 79.9 GB
EGAF50000094558 bam 62.0 GB
EGAF50000094559 bam 74.4 GB
EGAF50000094560 bam 55.2 GB
EGAF50000094561 bam 60.6 GB
EGAF50000094562 bam 93.7 GB
EGAF50000094563 bam 94.7 GB
EGAF50000094564 bam 88.9 GB
EGAF50000094565 bam 75.6 GB
EGAF50000094566 bam 79.5 GB
EGAF50000094567 bam 80.9 GB
EGAF50000094568 bam 66.3 GB
EGAF50000094569 bam 77.3 GB
EGAF50000094570 bam 94.7 GB
EGAF50000094571 bam 85.0 GB
EGAF50000094572 bam 68.5 GB
EGAF50000094573 bam 76.9 GB
EGAF50000094574 bam 75.5 GB
EGAF50000094575 bam 90.8 GB
EGAF50000094576 bam 73.5 GB
EGAF50000094577 bam 82.4 GB
EGAF50000094578 bam 94.5 GB
EGAF50000094579 bam 90.2 GB
EGAF50000094580 bam 76.5 GB
EGAF50000094581 bam 60.9 GB
EGAF50000094582 bam 57.4 GB
EGAF50000094583 bam 78.2 GB
EGAF50000094584 bam 77.6 GB
EGAF50000094585 bam 93.7 GB
EGAF50000094586 bam 79.0 GB
EGAF50000094587 bam 74.2 GB
EGAF50000094588 bam 47.2 GB
EGAF50000094589 bam 79.7 GB
EGAF50000094590 bam 99.5 GB
EGAF50000094591 bam 65.7 GB
EGAF50000094592 bam 58.4 GB
EGAF50000094593 bam 75.8 GB
EGAF50000094594 bam 67.4 GB
EGAF50000094595 bam 77.7 GB
EGAF50000094596 bam 87.2 GB
EGAF50000094597 bam 77.7 GB
EGAF50000094598 bam 61.7 GB
EGAF50000094599 bam 81.6 GB
EGAF50000094600 bam 80.2 GB
EGAF50000094601 bam 57.9 GB
EGAF50000094602 bam 81.4 GB
EGAF50000094603 bam 72.9 GB
EGAF50000094604 bam 93.7 GB
EGAF50000094605 bam 69.1 GB
EGAF50000094606 bam 85.1 GB
EGAF50000094607 bam 51.3 GB
EGAF50000094608 bam 68.7 GB
EGAF50000094609 bam 73.0 GB
EGAF50000094610 bam 60.3 GB
EGAF50000094611 bam 61.0 GB
EGAF50000094612 bam 84.5 GB
EGAF50000094613 bam 61.4 GB
EGAF50000094614 bam 91.4 GB
EGAF50000094615 bam 53.5 GB
EGAF50000094616 bam 77.4 GB
EGAF50000094617 bam 77.9 GB
EGAF50000094618 bam 69.5 GB
EGAF50000094619 bam 69.8 GB
EGAF50000094620 bam 40.9 GB
EGAF50000094621 bam 81.6 GB
EGAF50000094622 bam 52.2 GB
EGAF50000094623 bam 41.4 GB
EGAF50000094624 bam 60.4 GB
EGAF50000094625 bam 63.2 GB
EGAF50000094626 bam 84.3 GB
EGAF50000094627 bam 61.2 GB
EGAF50000094628 bam 55.5 GB
EGAF50000094629 bam 87.8 GB
EGAF50000094630 bam 91.8 GB
EGAF50000094631 bam 89.8 GB
EGAF50000094632 bam 61.8 GB
EGAF50000094633 bam 90.5 GB
EGAF50000094634 bam 78.6 GB
EGAF50000094635 bam 55.0 GB
EGAF50000094636 bam 57.2 GB
EGAF50000094637 bam 83.3 GB
EGAF50000094638 bam 91.5 GB
EGAF50000094639 bam 54.5 GB
EGAF50000094640 bam 69.6 GB
EGAF50000094641 bam 64.8 GB
EGAF50000094642 bam 55.6 GB
EGAF50000094643 bam 85.5 GB
EGAF50000094644 bam 56.1 GB
EGAF50000094645 bam 103.8 GB
EGAF50000094646 bam 54.8 GB
EGAF50000094647 bam 98.1 GB
EGAF50000094648 bam 71.9 GB
EGAF50000094649 bam 58.1 GB
EGAF50000094650 bam 62.6 GB
EGAF50000094651 bam 93.3 GB
EGAF50000094652 bam 55.9 GB
EGAF50000094653 bam 83.7 GB
EGAF50000094654 bam 88.7 GB
EGAF50000094655 bam 82.7 GB
EGAF50000094656 bam 85.4 GB
EGAF50000094657 bam 49.0 GB
EGAF50000094658 bam 63.4 GB
EGAF50000094659 bam 76.2 GB
EGAF50000094660 bam 36.5 GB
EGAF50000094661 bam 86.4 GB
EGAF50000094662 bam 72.2 GB
EGAF50000094663 bam 97.1 GB
EGAF50000094664 bam 84.7 GB
EGAF50000094665 bam 87.6 GB
EGAF50000094666 bam 73.6 GB
EGAF50000094667 bam 77.8 GB
EGAF50000094668 bam 57.5 GB
EGAF50000094669 bam 79.8 GB
EGAF50000094670 bam 98.4 GB
EGAF50000094671 bam 40.6 GB
EGAF50000094672 bam 56.7 GB
EGAF50000094673 bam 36.5 GB
EGAF50000094674 bam 87.9 GB
EGAF50000094675 bam 110.7 GB
EGAF50000094676 bam 60.9 GB
EGAF50000094677 bam 93.6 GB
EGAF50000094678 bam 61.9 GB
EGAF50000094679 bam 84.2 GB
EGAF50000094680 bam 97.4 GB
EGAF50000094681 bam 48.5 GB
EGAF50000094682 bam 99.7 GB
EGAF50000094683 bam 38.4 GB
EGAF50000094684 bam 77.8 GB
EGAF50000094685 bam 95.8 GB
EGAF50000094686 bam 88.6 GB
272 Files (20.1 TB)