RNA sequencing of BCP-LBL patients samples
In order to perform comprehensive transcriptomics and gene fusion analyses of a cohort of BCP-LBL patients, we performed RNA sequencing of 49 tissue samples from BCP-LBL patients. Because the material was available as FFPE, and had a relative low quality, we used a capture-based approach, where NGS libraries obtained from total RNA were captured in 4-plex, using a whole exome capture panel.
- 09/04/2024
- 49 samples
- DAC: EGAC50000000181
- Technology: Illumina NovaSeq 6000
BCP-LBL Policy
Researchers can use the data as far as they ackowledge our work in a future pubblication.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000289 | Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000098122 | fastq.gz | 7.3 GB | ||
| EGAF50000098123 | fastq.gz | 7.5 GB | ||
| EGAF50000098124 | fastq.gz | 8.9 GB | ||
| EGAF50000098125 | fastq.gz | 9.2 GB | ||
| EGAF50000098126 | fastq.gz | 11.7 GB | ||
| EGAF50000098127 | fastq.gz | 12.1 GB | ||
| EGAF50000098128 | fastq.gz | 3.6 GB | ||
| EGAF50000098129 | fastq.gz | 3.7 GB | ||
| EGAF50000098130 | fastq.gz | 9.8 GB | ||
| EGAF50000098131 | fastq.gz | 10.2 GB | ||
| EGAF50000098132 | fastq.gz | 12.9 GB | ||
| EGAF50000098133 | fastq.gz | 13.0 GB | ||
| EGAF50000098134 | fastq.gz | 9.9 GB | ||
| EGAF50000098135 | fastq.gz | 10.2 GB | ||
| EGAF50000098136 | fastq.gz | 4.8 GB | ||
| EGAF50000098137 | fastq.gz | 4.7 GB | ||
| EGAF50000098138 | fastq.gz | 1.9 GB | ||
| EGAF50000098139 | fastq.gz | 1.9 GB | ||
| EGAF50000098140 | fastq.gz | 10.6 GB | ||
| EGAF50000098141 | fastq.gz | 10.4 GB | ||
| EGAF50000098142 | fastq.gz | 8.4 GB | ||
| EGAF50000098143 | fastq.gz | 8.5 GB | ||
| EGAF50000098144 | fastq.gz | 13.5 GB | ||
| EGAF50000098145 | fastq.gz | 14.2 GB | ||
| EGAF50000098146 | fastq.gz | 8.0 GB | ||
| EGAF50000098147 | fastq.gz | 7.9 GB | ||
| EGAF50000098148 | fastq.gz | 12.1 GB | ||
| EGAF50000098149 | fastq.gz | 12.5 GB | ||
| EGAF50000098150 | fastq.gz | 6.4 GB | ||
| EGAF50000098151 | fastq.gz | 6.2 GB | ||
| EGAF50000098152 | fastq.gz | 5.6 GB | ||
| EGAF50000098153 | fastq.gz | 5.6 GB | ||
| EGAF50000098154 | fastq.gz | 6.4 GB | ||
| EGAF50000098155 | fastq.gz | 6.4 GB | ||
| EGAF50000098156 | fastq.gz | 8.7 GB | ||
| EGAF50000098157 | fastq.gz | 9.0 GB | ||
| EGAF50000098158 | fastq.gz | 8.7 GB | ||
| EGAF50000098159 | fastq.gz | 8.8 GB | ||
| EGAF50000098160 | fastq.gz | 5.1 GB | ||
| EGAF50000098161 | fastq.gz | 5.2 GB | ||
| EGAF50000098162 | fastq.gz | 12.9 GB | ||
| EGAF50000098163 | fastq.gz | 12.9 GB | ||
| EGAF50000098164 | fastq.gz | 6.1 GB | ||
| EGAF50000098165 | fastq.gz | 6.3 GB | ||
| EGAF50000098166 | fastq.gz | 5.5 GB | ||
| EGAF50000098167 | fastq.gz | 5.4 GB | ||
| EGAF50000098168 | fastq.gz | 14.3 GB | ||
| EGAF50000098169 | fastq.gz | 14.7 GB | ||
| EGAF50000098170 | fastq.gz | 9.4 GB | ||
| EGAF50000098171 | fastq.gz | 9.6 GB | ||
| EGAF50000098172 | fastq.gz | 11.1 GB | ||
| EGAF50000098173 | fastq.gz | 11.1 GB | ||
| EGAF50000098174 | fastq.gz | 8.5 GB | ||
| EGAF50000098175 | fastq.gz | 8.4 GB | ||
| EGAF50000098176 | fastq.gz | 4.3 GB | ||
| EGAF50000098177 | fastq.gz | 4.3 GB | ||
| EGAF50000098178 | fastq.gz | 9.4 GB | ||
| EGAF50000098179 | fastq.gz | 9.6 GB | ||
| EGAF50000098180 | fastq.gz | 10.7 GB | ||
| EGAF50000098181 | fastq.gz | 10.6 GB | ||
| EGAF50000098182 | fastq.gz | 9.5 GB | ||
| EGAF50000098183 | fastq.gz | 9.2 GB | ||
| EGAF50000098184 | fastq.gz | 4.1 GB | ||
| EGAF50000098185 | fastq.gz | 4.0 GB | ||
| EGAF50000098186 | fastq.gz | 16.9 GB | ||
| EGAF50000098187 | fastq.gz | 17.6 GB | ||
| EGAF50000098188 | fastq.gz | 14.9 GB | ||
| EGAF50000098189 | fastq.gz | 15.1 GB | ||
| EGAF50000098190 | fastq.gz | 7.2 GB | ||
| EGAF50000098191 | fastq.gz | 7.4 GB | ||
| EGAF50000098192 | fastq.gz | 9.9 GB | ||
| EGAF50000098193 | fastq.gz | 10.1 GB | ||
| EGAF50000098194 | fastq.gz | 13.1 GB | ||
| EGAF50000098195 | fastq.gz | 12.6 GB | ||
| EGAF50000098196 | fastq.gz | 10.4 GB | ||
| EGAF50000098197 | fastq.gz | 10.4 GB | ||
| EGAF50000098198 | fastq.gz | 9.1 GB | ||
| EGAF50000098199 | fastq.gz | 9.0 GB | ||
| EGAF50000098200 | fastq.gz | 3.2 GB | ||
| EGAF50000098201 | fastq.gz | 3.2 GB | ||
| EGAF50000098228 | fastq.gz | 5.4 GB | ||
| EGAF50000098229 | fastq.gz | 5.4 GB | ||
| EGAF50000098230 | fastq.gz | 13.4 GB | ||
| EGAF50000098231 | fastq.gz | 13.5 GB | ||
| EGAF50000098232 | fastq.gz | 9.9 GB | ||
| EGAF50000098233 | fastq.gz | 9.6 GB | ||
| EGAF50000098234 | fastq.gz | 7.4 GB | ||
| EGAF50000098235 | fastq.gz | 7.3 GB | ||
| EGAF50000098236 | fastq.gz | 11.9 GB | ||
| EGAF50000098237 | fastq.gz | 12.0 GB | ||
| EGAF50000098256 | fastq.gz | 11.3 GB | ||
| EGAF50000098257 | fastq.gz | 11.6 GB | ||
| EGAF50000098258 | fastq.gz | 5.4 GB | ||
| EGAF50000098259 | fastq.gz | 5.6 GB | ||
| EGAF50000098272 | fastq.gz | 12.4 GB | ||
| EGAF50000098273 | fastq.gz | 12.7 GB | ||
| EGAF50000098300 | fastq.gz | 7.6 GB | ||
| EGAF50000098301 | fastq.gz | 7.6 GB | ||
| 98 Files (883.5 GB) | ||||